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Series GSE193045 Query DataSets for GSE193045
Status Public on Jul 09, 2023
Title Interleukin-10/CSF1R fusion protein rejuvenates the exhausted T cells for executing antitumor activity II
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Bulk RNA sequence (RNA-seq) has been used to explore the effect of IL10/CSF1R fusion protein modulation in tumor microenvironment. Four groups were analyzed which contain Ctrl, CSF1R, IL10 and BF10. 4T1 breast cancer cells were orthotopic injection into Balb/c mice. tumor tissue has been isolated (~ 100 mm3) and total RNA were extracted by Trizol, followed by cDNA were sequenced by Illumina NextSeq 550.
 
Overall design Examination of therapeutic modulation of IL10/CSF1R fusion protein within tumor microenvironment in mice cancer model. RNA-seq of tumor tissues from orthotopic cancer tissue after four dose treatments.
 
Contributor(s) Chang Y, Yang M
Citation(s) 37586318
Submission date Jan 04, 2022
Last update date Sep 14, 2023
Contact name JuPei Chen
E-mail(s) pei03231987@nycu.edu.tw
Organization name National Yang Ming Chiao Tung University
Street address No. 155, Sec. 2, Linong St. Beitou Dist.
City Taipei
ZIP/Postal code 112
Country Taiwan
 
Platforms (1)
GPL21626 NextSeq 550 (Mus musculus)
Samples (12)
GSM5772177 4T1_BF10-3
GSM5772178 4T1_BF10-6
GSM5772179 4T1_BF10-7
Relations
BioProject PRJNA794177

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE193045_BF10vsControl-DEG_result_deseq2.csv.gz 1.8 Mb (ftp)(http) CSV
GSE193045_BF10vsIL10-DEG_result_deseq2.csv.gz 1.8 Mb (ftp)(http) CSV
GSE193045_GA866_4T1_FPKM.txt.gz 1.1 Mb (ftp)(http) TXT
GSE193045_IL10vsControl-DEG_result_deseq2.csv.gz 1.9 Mb (ftp)(http) CSV
GSE193045_antiCSF1RvsControl-DEG_result_deseq2.csv.gz 1.8 Mb (ftp)(http) CSV
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Raw data are available in SRA
Processed data are available on Series record

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