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Series GSE190111 Query DataSets for GSE190111
Status Public on Jul 09, 2023
Title Interleukin-10/CSF1R fusion protein rejuvenates the exhausted T cells for executing antitumor activity
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Single cell sequence (SC-seq) has been used to explore the effect of IL10/CSF1R fusion protein modulation in tumor microenvironment. Four groups were analyzed which contain Ctrl, CSF1R, IL10 and BF10. MTC-Q1 oral cancer cells were orthotopic injection in C57BL/6 mice. CD45+ immune cells has been isolated, analyzed and sequenced by dropped based scRNA-seq, cDNA were sequenced by Illumina Novaseq 6000.
 
Overall design Examination of therapeutic modulation of IL10/CSF1R fusion protein within tumor microenvironment in mice cancer model. SC-seq of CD45+ immune infiltrated cells from orthotopic cancer tissue after four dose treatments.
 
Contributor(s) Chang Y, Yang M
Citation(s) 37586318
Submission date Dec 03, 2021
Last update date Sep 14, 2023
Contact name JuPei Chen
E-mail(s) pei03231987@nycu.edu.tw
Organization name National Yang Ming Chiao Tung University
Street address No. 155, Sec. 2, Linong St. Beitou Dist.
City Taipei
ZIP/Postal code 112
Country Taiwan
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (4)
GSM5714286 BF10_CD45+
GSM5714287 CSF1R_CD45+
GSM5714288 Ctrl_CD45+
Relations
BioProject PRJNA785881

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE190111_Aggr_barcodes.tsv.gz 106.5 Kb (ftp)(http) TSV
GSE190111_Aggr_features.tsv.gz 284.1 Kb (ftp)(http) TSV
GSE190111_Aggr_matrix.mtx.gz 286.3 Mb (ftp)(http) MTX
GSE190111_RAW.tar 298.6 Mb (http)(custom) TAR (of MTX, TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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