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Series GSE189835 Query DataSets for GSE189835
Status Public on Aug 20, 2023
Title Bromodomain member BRD4 is required for hematopoietic stem cell functions (scRNA-Seq)
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary To investigate the role of BRD4 in normal hematopoiesis, Brd4 conditional KO mouse model was generated. We purified the cKit+ and LSK cells from bone marrow of WT and Brd4 KO mice and performed the single cell RNA-seq to study the molecular changes in each cell population.
 
Overall design Single cell RNA-seq for bone marrow cKit+ and LSK cells from WT (n=2) and Brd4 conditional KO (n=2) mice.
 
Contributor(s) Yang F, Yang H, Sui P
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Submission date Nov 29, 2021
Last update date Aug 21, 2023
Contact name Hui Yang
Organization name UTHSCSA
Street address 5114 medical dr.
City San Antonio
State/province Texas
ZIP/Postal code 78229
Country USA
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (6)
GSM5708415 Yang-10X-WT
GSM5708416 Yang-10X-KO
GSM5708417 Hui-WT1
This SubSeries is part of SuperSeries:
GSE189836 Bromodomain member BRD4 is required for hematopoietic stem cell functions
Relations
BioProject PRJNA784621
SRA SRP348496

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE189835_RAW.tar 306.6 Mb (http)(custom) TAR (of H5)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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