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Series GSE189834 Query DataSets for GSE189834
Status Public on Aug 20, 2023
Title Bromodomain member BRD4 is required for hematopoietic stem cell functions (RNA-Seq)
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary To investigate the role of BRD4 in normal hematopoiesis, Brd4 conditional KO mouse model was generated. We purified the Lin-cKit+ cells from bone marrow of WT and Brd4 KO mice and performed the RNA-seq to study the molecular changes in each cell population.
 
Overall design RNA-seq for bone marrow Lin-cKit+ cells from WT (n=4) and Brd4 conditional KO (n=4) mice.
 
Contributor(s) Yang F, Yang H, Sui P
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Nov 29, 2021
Last update date Aug 20, 2023
Contact name Hui Yang
Organization name UTHSCSA
Street address 5114 medical dr.
City San Antonio
State/province Texas
ZIP/Postal code 78229
Country USA
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (8)
GSM5708407 WT-100
GSM5708408 WT-119
GSM5708409 WT-122
This SubSeries is part of SuperSeries:
GSE189836 Bromodomain member BRD4 is required for hematopoietic stem cell functions
Relations
BioProject PRJNA784622
SRA SRP348495

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE189834_LK_RNA_Seq_raw_gene_counts_matrix.txt.gz 502.3 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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