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Series GSE18628 Query DataSets for GSE18628
Status Public on May 21, 2010
Title MicroRNA profiling shows different response to retinoids in estrogen-receptor positive and negative cells
Platform organisms Arabidopsis thaliana; Saccharomyces cerevisiae; Caenorhabditis elegans; Drosophila melanogaster; Gallus gallus; Macaca mulatta; Homo sapiens; Bos taurus; Mus musculus; Rattus norvegicus
Sample organism Homo sapiens
Experiment type Non-coding RNA profiling by array
Summary This Series reports results of miRNA profiling of estrogen-receptor-positive (MCF7) and estrogen-receptor-negative (MDA-MB-231) cells.
Retinoic Acid (RA) induces mir-21 in MCF-7 but not in MDA-MB-231 cells.
MCF-7 and MDA-MB-231 cells were treated (or not) with retinoic acid (RA) and grown for either 6 hours or 48 hours.
Overall design miRNA profiling: Factorial design 2x2x2 'cube'; main factors: RA, cells, time; interactions: RA.cells, RA.time, cells.time, RA.cells.time.
Contributor(s) Terao M, Fratelli M, Tsykin A, Goodall GJ, Garattini E
Citation(s) 21131358
Submission date Oct 19, 2009
Last update date Mar 21, 2012
Contact name Anna Tsykin
Phone 61 8 8222 3479
Organization name SA Pathology
Department Hanson Institute
Lab Centre for Cancer Research
Street address Frome Road
City Adelaide
State/province SA
ZIP/Postal code 5000
Country Australia
Platforms (1)
GPL9472 Adelaide microarray facility Exiqon LNA miRNA microarray_version8.1
Samples (24)
GSM462975 time
GSM462976 RA
GSM462977 - RA
This SubSeries is part of SuperSeries:
GSE18693 Effects of retinoids on estrogen-receptor-positive and -negative breast carcinoma cells: mRNA and miRNA profiling
BioProject PRJNA123795

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE18628_RAW.tar 7.7 Mb (http)(custom) TAR (of SPOT)
Processed data included within Sample table

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