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Series GSE186158 Query DataSets for GSE186158
Status Public on Jan 30, 2023
Title Single-cell transcriptomic atlas reveals the evolution of immune cells and molecules across multiple vertebrate species
Organisms Danio rerio; Xenopus tropicalis; Macaca mulatta; Homo sapiens; Sus scrofa; Mus musculus; Rattus norvegicus
Experiment type Expression profiling by high throughput sequencing
Summary We utilized single-cell RNA sequencing (scRNA-seq) to carry out comparative transcriptome analysis in various immune cells from the spleens across seven vertebrate species.
Overall design High-dimensional single-cell RNA sequencing (10X Genomics) was used to profile the transcriptomes of total immune cells isolated from seven organism spleens.
Contributor(s) Zhang B, Jiao A, Zhang C, Wang X
Citation(s) 36871615
Submission date Oct 19, 2021
Last update date Mar 21, 2023
Contact name Cangang Zhang
Phone 13636810556
Organization name xian jiaotong university
Street address Yanta district, xi 'an city, shaanxi province
City xian
State/province State...
ZIP/Postal code 710000
Country China
Platforms (7)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
GPL24995 Illumina NovaSeq 6000 (Danio rerio)
Samples (7)
GSM5639492 Fish
GSM5639493 Frog
GSM5639494 Mouse
BioProject PRJNA772751
SRA SRP342163

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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE186158_RAW.tar 465.9 Mb (http)(custom) TAR (of TAR)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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