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GEO accession:
Series GSE185930
Query DataSets for GSE185930
Status
Public on May 23, 2022
Title
Distinct roles of CKM-Mediator in controlling Polycomb-dependent chromosomal interactions and priming genes for induction
Organisms
Drosophila melanogaster
;
Homo sapiens
;
Mus musculus
Experiment type
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Other
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
36220895
Submission date
Oct 14, 2021
Last update date
Jan 04, 2024
Contact name
Emilia Dimitrova
E-mail(s)
emilia.dimitrova@bioch.ox.ac.uk
Organization name
University of Oxford
Department
Biochemistry
Lab
Rob Klose
Street address
South Parks Road
City
Oxford
ZIP/Postal code
OX1 3QU
Country
United Kingdom
Platforms (3)
GPL19057
Illumina NextSeq 500 (Mus musculus)
GPL19415
Illumina NextSeq 500 (Homo sapiens; Mus musculus)
GPL25537
Illumina NextSeq 500 (Drosophila melanogaster; Mus musculus)
Samples (148)
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More...
GSM5627323
MED13-13lfl_ES_UNT_rep2_CapC_set1
GSM5627324
MED13-13lfl_ES_UNT_rep3_CapC_set1
GSM5627325
MED13-13lfl_ES_UNT_rep4_CapC_set1
GSM5627326
MED13-13lfl_ES_UNT_rep2_CapC_set2
GSM5627327
MED13-13lfl_ES_UNT_rep4_CapC_set2
GSM5627328
MED13-13lfl_ES_TAM_rep2_CapC_set1
GSM5627329
MED13-13lfl_ES_TAM_rep3_CapC_set1
GSM5627330
MED13-13lfl_ES_TAM_rep4_CapC_set1
GSM5627331
MED13-13lfl_ES_TAM_rep2_CapC_set2
GSM5627332
MED13-13lfl_ES_TAM_rep4_CapC_set2
GSM5627333
Pcgf2fl_ES_UNT_rep1_CapC_set1
GSM5627334
Pcgf2fl_ES_UNT_rep3_CapC_set1
GSM5627335
Pcgf2fl_ES_UNT_rep4_CapC_set1
GSM5627336
Pcgf2fl_ES_UNT_rep1_CapC_set2
GSM5627337
Pcgf2fl_ES_UNT_rep3_CapC_set2
GSM5627338
Pcgf2fl_ES_TAM_rep1_CapC_set1
GSM5627339
Pcgf2fl_ES_TAM_rep3_CapC_set1
GSM5627340
Pcgf2fl_ES_TAM_rep4_CapC_set1
GSM5627341
Pcgf2fl_ES_UNT_rep1_CapC_set2 72
GSM5627342
Pcgf2fl_ES_UNT_rep3_CapC_set2 72
GSM5627343
TetR-GFP_ES_rep1
GSM5627344
TetR-GFP_ES_rep2
GSM5627345
TetR-GFP_ES_rep3
GSM5627346
TetR-CDK8_ES_rep1
GSM5627347
TetR-CDK8_ES_rep2
GSM5627348
TetR-CDK8_ES_rep3
GSM5627349
TetR-PCGF2_ES_rep1
GSM5627350
TetR-PCGF2_ES_rep2
GSM5627351
TetR-PCGF2_ES_rep3
GSM5627352
Med1313lfl_UNT_CDK8_rep1
GSM5627353
Med1313lfl_UNT_CDK8_rep2
GSM5627354
Med1313lfl_UNT_CDK8_rep3
GSM5627355
Med1313lfl_TAM_CDK8_rep1
GSM5627356
Med1313lfl_TAM_CDK8_rep2
GSM5627357
Med1313lfl_TAM_CDK8_rep3
GSM5627358
Med1313lfl_UNT_RING1B_rep1
GSM5627359
Med1313lfl_UNT_RING1B_rep2
GSM5627360
Med1313lfl_UNT_RING1B_rep3
GSM5627361
Med1313lfl_TAM_RING1B_rep1
GSM5627362
Med1313lfl_TAM_RING1B_rep2
GSM5627363
Med1313lfl_TAM_RING1B_rep3
GSM5627364
Med1313lfl_UNT_PCGF2_rep1
GSM5627365
Med1313lfl_UNT_PCGF2_rep2
GSM5627366
Med1313lfl_UNT_PCGF2_rep3
GSM5627367
Med1313lfl_TAM_PCGF2_rep1
GSM5627368
Med1313lfl_TAM_PCGF2_rep2
GSM5627369
Med1313lfl_TAM_PCGF2_rep3
GSM5627370
Med1313lfl_UNT_Input_rep1
GSM5627371
Med1313lfl_UNT_Input_rep2
GSM5627372
Med1313lfl_UNT_Input_rep3
GSM5627373
Med1313lfl_TAM_Input_rep1
GSM5627374
Med1313lfl_TAM_Input_rep2
GSM5627375
Med1313lfl_TAM_Input_rep3
GSM5627376
Med1313lfl-MED14-T7_ESC_UNT_T7_rep1
GSM5627377
Med1313lfl-MED14-T7_ESC_UNT_T7_rep2
GSM5627378
Med1313lfl-MED14-T7_ESC_UNT_T7_rep3
GSM5627379
Med1313lfl-MED14-T7_ESC_TAM_T7_rep1
GSM5627380
Med1313lfl-MED14-T7_ESC_TAM_T7_rep2
GSM5627381
Med1313lfll-MED14-T7_ESC_TAM_T7_rep3
GSM5627382
Med1313lfl-MED14-T7_RA_UNT_T7_rep1
GSM5627383
Med1313lfl-MED14-T7_RA_UNT_T7_rep2
GSM5627384
Med1313lfl-MED14-T7_RA_UNT_T7_rep3
GSM5627385
Med1313lfl-MED14-T7_RA_TAM_T7_rep1
GSM5627386
Med1313lfl-MED14-T7_RA_TAM_T7_rep2
GSM5627387
Med1313lfl-MED14-T7_RA_TAM_T7_rep3
GSM5627388
Med1313lfll-MED14-T7_RA_UNT_CDK8_rep1
GSM5627389
Med1313lfl-MED14-T7_RA_UNT_CDK8_rep2
GSM5627390
Med1313lfl-MED14-T7_RA_UNT_CDK8_rep3
GSM5627391
Med1313lfl-MED14-T7_ESC_UNT_Input_rep1
GSM5627392
Med1313lfl-MED14-T7_ESC_UNT_Input_rep2
GSM5627393
Med1313lfl-MED14-T7_ESC_UNT_Input_rep3
GSM5627394
Med1313lfl-MED14-T7_ESC_TAM_Input_rep1
GSM5627395
Med1313lfl-MED14-T7_ESC_TAM_Input_rep2
GSM5627396
Med1313lfl-MED14-T7_ESC_TAM_Input_rep3
GSM5627397
Med1313lfl-MED14-T7_RA_UNT_Input_rep1
GSM5627398
Med1313lfl-MED14-T7_RA_UNT_Input_rep2
GSM5627399
Med1313lfl-MED14-T7_RA_UNT_Input_rep3
GSM5627400
Med1313lfl-MED14-T7_RA_TAM_Input_rep1
GSM5627401
Med1313lfl-MED14-T7_RA_TAM_Input_rep2
GSM5627402
Med1313lfl-MED14-T7_RA_TAM_Input_rep3
GSM5627403
Med1313lfl_NChIP_H3K27me3_UNT_rep1
GSM5627404
Med1313lfl_NChIP_H3K27me3_UNT_rep2
GSM5627405
Med1313lfl_NChIP_H3K27me3_UNT_rep3
GSM5627406
Med1313lfl_NChIP_H3K27me3_TAM_rep1
GSM5627407
Med1313lfl_NChIP_H3K27me3_TAM_rep2
GSM5627408
Med1313lfl_NChIP_H3K27me3_TAM_rep3
GSM5627409
Med1313lfl_NChIP_Input_UNT_rep1
GSM5627410
Med1313lfl_NChIP_Input_UNT_rep2
GSM5627411
Med1313lfl_NChIP_Input_UNT_rep3
GSM5627412
Med1313lfl_NChIP_Input_TAM_rep1
GSM5627413
Med1313lfl_NChIP_Input_TAM_rep2
GSM5627414
Med1313lfl_NChIP_Input_TAM_rep3
GSM5627415
Pcgf4-/-Pcgf2fl_CDK8_UNT_rep1
GSM5627416
Pcgf4-/-Pcgf2fl_CDK8_UNT_rep2
GSM5627417
Pcgf4-/-Pcgf2fl_CDK8_UNT_rep3
GSM5627418
Pcgf4-/-Pcgf2fl_CDK8_TAM_rep1
GSM5627419
Pcgf4-/-Pcgf2fl_CDK8_TAM_rep2
GSM5627420
Pcgf4-/-Pcgf2fl_CDK8_TAM_rep3
GSM5627421
Pcgf4-/-Pcgf2fl_Input_UNT_rep1
GSM5627422
Pcgf4-/-Pcgf2fl_Input_UNT_rep2
GSM5627423
Pcgf4-/-Pcgf2fl_Input_UNT_rep3
GSM5627424
Pcgf4-/-Pcgf2fl_Input_TAM_rep1
GSM5627425
Pcgf4-/-Pcgf2fl_Input_TAM_rep2
GSM5627426
Pcgf4-/-Pcgf2fl_Input_TAM_rep3
GSM5627435
Med1313lfl_ESC_UNT_rep1
GSM5627436
Med1313lfl_ESC_UNT_rep2
GSM5627437
Med1313lfl_ESC_UNT_rep3
GSM5627438
Med1313lfl_ESC_UNT_rep4
GSM5627439
Med1313lfl_ESC_TAM_rep1
GSM5627440
Med1313lfl_ESC_TAM_rep2
GSM5627441
Med1313lfl_ESC_TAM_rep3
GSM5627442
Med1313lfl_ESC_TAM_rep4
GSM5627443
Med1313lfl_RA_UNT_rep1
GSM5627444
Med1313lfl_RA_UNT_rep2
GSM5627445
Med1313lfl_RA_UNT_rep3
GSM5627446
Med1313lfl_RA_UNT_rep4
GSM5627447
Med1313lfl_RA_TAM_rep1
GSM5627448
Med1313lfl_RA_TAM_rep2
GSM5627449
Med1313lfl_RA_TAM_rep3
GSM5627450
Med1313lfl_RA_TAM_rep4
GSM5627451
Pcgf4-/-Pcgf2flfl_ESC_UNT_rep1
GSM5627452
Pcgf4-/-Pcgf2flfl_ESC_UNT_rep2
GSM5627453
Pcgf4-/-Pcgf2flfl_ESC_UNT_rep3
GSM5627454
Pcgf4-/-Pcgf2flfl_ESC_UNT_rep4
GSM5627455
Pcgf4-/-Pcgf2flfl_ESC_TAM_rep1
GSM5627456
Pcgf4-/-Pcgf2flfl_ESC_TAM_rep2
GSM5627457
Pcgf4-/-Pcgf2flfl_ESC_TAM_rep3
GSM5627458
Pcgf4-/-Pcgf2flfl_ESC_TAM_rep4
GSM5627459
Pcgf4-/-Pcgf2flfl_RA_UNT_rep1
GSM5627460
Pcgf4-/-Pcgf2flfl_RA_UNT_rep2
GSM5627461
Pcgf4-/-Pcgf2flfl_RA_UNT_rep3
GSM5627462
Pcgf4-/-Pcgf2flfl_RA_UNT_rep4
GSM5627463
Pcgf4-/-Pcgf2flfl_RA_TAM_rep1
GSM5627464
Pcgf4-/-Pcgf2flfl_RA_TAM_rep2
GSM5627465
Pcgf4-/-Pcgf2flfl_RA_TAM_rep3
GSM5627466
Pcgf4-/-Pcgf2flfl_RA_TAM_rep4
GSM5685410
Med1313lfl_UNT_HIC_rep0
GSM5685411
Med1313lfl_UNT_HIC_rep1
GSM5685412
Med1313lfl_UNT_HIC_rep2
GSM5685413
Med1313lfl_TAM_HiC_rep0
GSM5685414
Med1313lfl_TAM_HiC_rep1
GSM5685415
Med1313lfl_TAM_HiC_rep2
GSM5952392
Med1313lfl_UNT_CBX7_rep1
GSM5952393
Med1313lfl_UNT_CBX7_rep2
GSM5952394
Med1313lfl_UNT_CBX7_rep3
GSM5952395
Med1313lfl_TAM_CBX7_rep1
GSM5952396
Med1313lfl_TAM_CBX7_rep2
GSM5952397
Med1313lfl_TAM_CBX7_rep3
This SuperSeries is composed of the following SubSeries:
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More...
GSE185926
Distinct roles for CDK-Mediator in controlling Polycomb-dependent chromosomal interactions and priming genes for induction (CaptureC)
GSE185927
Distinct roles for CDK-Mediator in controlling Polycomb-dependent chromosomal interactions and priming genes for induction (ChIP-Seq)
GSE185929
Distinct roles for CDK-Mediator in controlling Polycomb-dependent chromosomal interactions and priming genes for induction (RNA-Seq)
GSE188551
A dual role for CDK-Mediator in controlling Polycomb-dependent topology and priming genes for induction [Hi-C]
Relations
BioProject
PRJNA771381
Download family
Format
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Series Matrix File(s)
TXT
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File type/resource
GSE185930_RAW.tar
17.5 Gb
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