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| Status |
Public on Jan 07, 2022 |
| Title |
Single-nucleus RNA sequencing of gastrocnemius and plantaris muscles. |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
Skeletal muscle is composed of multinucleated myofibers, in which nuclei share the cytoplasm, and other cell types. Here, we performed single-nucleus RNA sequencing (snRNA-Seq) to determine the gene expressions in each nucleus in gastrocnemius and plantaris muscles collected from 12-week-old C57BL/6 wild-type mice. Our datasets also provided a basis for comparing gene expressions between myofibers and other cell types and discovering the novel cell populations in muscle tissues.
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| Overall design |
Single-nucleus RNA sequensing of gastrocnemius and plantaris muscles of 12-week-old C57BL/6 wild-type mice.
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| Contributor(s) |
Fujimaki S, Nagahisa H, Usuki S, Yasunaga K, Ono Y |
| Citation(s) |
35228746 |
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| Submission date |
Oct 11, 2021 |
| Last update date |
Apr 08, 2022 |
| Contact name |
Shin Fujimaki |
| E-mail(s) |
shin.fujimaki0526@gmail.com
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| Organization name |
Kumamoto University
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| Department |
IMEG
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| Lab |
Muscle Development & Regeneration
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| Street address |
Honjo 2-2-1
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| City |
Kumamoto |
| ZIP/Postal code |
8600811 |
| Country |
Japan |
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| Platforms (1) |
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| Samples (2) |
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| Relations |
| BioProject |
PRJNA770368 |
| SRA |
SRP340870 |
