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Series GSE185327 Query DataSets for GSE185327
Status Public on Oct 19, 2021
Title Transcriptional analysis of noncanonical and canonical Tregs from ITK deficient mice (ITK KO)
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Regulatory T cells (Tregs) play a critical role in controlling autoimmunity and limiting tissue destruction and inflammation. IL2-inducible T cell kinase (Itk) belongs to the Tec family of tyrosine kinases and is an important component of TCR-mediated signaling. Here we showed that either genetic ablation of Itk signaling, or inhibition of Itk signaling pathways resulted in increased frequency of “noncanonical” CD4+CD25−FoxP3+ Tregs (ncTregs), as well as of “canonical” CD4+CD25+FoxP3+ Tregs (canTregs). Using in vivo models, we showed that ncTregs can prevent the development of acute graft-versus-host disease (GVHD), in part by reducing conventional T cell proliferation, proinflammatory cytokine production, and tissue damage. This reduction in GVHD occurred without disruption of graft-versus-leukemia (GVL) effects. RNA sequencing revealed that a number of effector, cell adhesion, and migration molecules were upregulated in Itk-/- ncTregs. Furthermore, disrupting the SLP76: ITK interaction using a specific peptide inhibitor led to enhanced Treg development in both mouse cells and primary human cells. This peptide inhibitor also significantly reduced inflammatory cytokine production in primary GVHD patient samples and mouse T cells without causing cell death or apoptosis. We provide evidence that specifically targeting Itk signaling could be a therapeutic strategy to treat autoimmune disorders
 
Overall design We analyzed FACS purified canonical (CD25+, FOXP3+) and noncanonical (CD25-, FOXP3+) Tregs of 3 different ITK deficient (ITK KO) mice and canonical (CD25+, FOXP3+) Tregs of 3 different WT mouse.
 
Contributor(s) Mammadli M, Waickman A
Citation(s) 34919342
NIH grant(s)
Grant ID Grant title Affiliation Name
K22 AI130182 Novel strategies to separate GVHD from GVT SUNY Upstate Medical University MOBIN KARIMI
Submission date Oct 05, 2021
Last update date Jan 10, 2022
Contact name Mobin Karimi
E-mail(s) karimim@upstate.edu
Phone 3154642344
Organization name Suny Upstate Medical University
Department Microbiology/Immunology
Lab Karimi
Street address 766 Irving Ave Suite 2281
City Syracuse
State/province NY
ZIP/Postal code 13210
Country USA
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (9)
GSM5610832 WT canonical Treg Rep1
GSM5610833 WT canonical Treg Rep2
GSM5610834 WT canonical Treg Rep3
Relations
BioProject PRJNA768766
SRA SRP340076

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Supplementary file Size Download File type/resource
GSE185327_RAW.tar 14.2 Mb (http)(custom) TAR (of TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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