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Series GSE185302 Query DataSets for GSE185302
Status Public on Jul 01, 2024
Title CLIP-seq of MSTR-1::FLAG and N2
Organism Caenorhabditis elegans
Experiment type Other
Summary Worms expressing 3xFLAG-tagged MSTR-1 (F22D6.2) were grown to young adult stage and CLIP-seq was performed to identify binding regions on target RNAs
 
Overall design Two biological replicates of MSTR-1::FLAG expressing worms, one biological replicate of WT (control) worms not expressing FLAG, and one size-matched input experiment
 
Contributor(s) Eroglu M, Derry WB
Citation(s) 39223373
Submission date Oct 04, 2021
Last update date Sep 30, 2024
Contact name Matthew Eroglu
E-mail(s) me2839@columbia.edu
Organization name Hospital for Sick Children
Department DSCB
Street address 686 Bay St
City Toronto
State/province ON
ZIP/Postal code M5G 0A4
Country Canada
 
Platforms (1)
GPL26672 Illumina NovaSeq 6000 (Caenorhabditis elegans)
Samples (4)
GSM5610381 Input
GSM5610382 N2 CLIP
GSM5610383 MSTR-1::FLAG CLIP1
This SubSeries is part of SuperSeries:
GSE185304 MSTR-1::FLAG and N2
Relations
BioProject PRJNA768476
SRA SRP339985

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE185302_Input_coverage.bigwig 4.8 Mb (ftp)(http) BIGWIG
GSE185302_MSTR-1_CLIP_mean_coverage.bigwig 10.6 Mb (ftp)(http) BIGWIG
GSE185302_MSTR-1_CLIP_peaks.tabular.txt.gz 79.6 Kb (ftp)(http) TXT
GSE185302_N2_CLIP_coverage.bigwig 1.3 Mb (ftp)(http) BIGWIG
GSE185302_N2_peaks.tabular.txt.gz 8.5 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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