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| Status |
Public on Feb 23, 2022 |
| Title |
Regulation of group 3 innate lymphoid cells by Setd2 [ATAC-seq] |
| Organism |
Mus musculus |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
To determine the molecular regulation of different subsets of ILC3s by Setd2, small intestinal NKp46- ILC3s (Thy1highCD45low NKp46-) and NKp46+ ILC3s (Thy1highCD45low NKp46+) from Setd2-deficient and control mice were subjected to assay for ATAC-seq.
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| Overall design |
Biological duplicates of 50000 ILC3s sorted by flow cytometry from the small intestine of 8 week old Rag1-/-;Setd2f/f or Rag1-/-;Rorc-cre;Setd2f/f mice were subjected to ATAC-seq analysis.
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| |
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| Contributor(s) |
Chang J, Qiu J |
| Citation(s) |
35294891 |
| |
| Submission date |
Aug 26, 2021 |
| Last update date |
Mar 21, 2022 |
| Contact name |
Ju Qiu |
| Organization name |
Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences
|
| Street address |
320 Yueyang Road
|
| City |
Shanghai |
| ZIP/Postal code |
200031 |
| Country |
China |
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| Platforms (1) |
| GPL24247 |
Illumina NovaSeq 6000 (Mus musculus) |
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| Samples (8)
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| This SubSeries is part of SuperSeries: |
| GSE182844 |
Regulation of group 3 innate lymphoid cells by Setd2 |
|
| Relations |
| BioProject |
PRJNA758031 |
| SRA |
SRP334213 |
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