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Series GSE181387 Query DataSets for GSE181387
Status Public on Oct 05, 2021
Title Cumulative in-cis mutagenesis in vivo reveals various functions for CTCF sites at the mouse Hoxd cluster
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Other
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 34711654
Submission date Aug 03, 2021
Last update date Jan 25, 2022
Contact name Lucille Lopez-Delisle
E-mail(s) lucille.delisle@epfl.ch
Organization name EPFL
Street address Station 19
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platforms (3)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
GPL19057 Illumina NextSeq 500 (Mus musculus)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
Samples (86)
GSM5501395 E10 posterior trunk ChIP CTCF
GSM5501396 E12 brain ChIP CTCF
GSM5501397 E12 DFL ChIP CTCF_re-analyzed
This SuperSeries is composed of the following SubSeries:
GSE181383 Cumulative in-cis mutagenesis in vivo reveals various functions for CTCF sites at the mouse Hoxd cluster [ChIP-seq]
GSE181384 Cumulative in-cis mutagenesis in vivo reveals various functions for CTCF sites at the mouse Hoxd cluster [ChIPmentation]
GSE181385 Cumulative in-cis mutagenesis in vivo reveals various functions for CTCF sites at the mouse Hoxd cluster [RNA-seq]
Relations
BioProject PRJNA751874

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE181387_RAW.tar 29.6 Gb (http)(custom) TAR (of BW, COOL, NARROWPEAK, TXT)
SRA Run SelectorHelp
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