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Series GSE180729 Query DataSets for GSE180729
Status Public on Aug 21, 2023
Title 10X genomics single-cell RNA sequencing of the testicular Thy1+ spermatogonia in Foxc2f/+ and Foxc2f/-;Ddx4-cre mice
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary 10X genomics single-cell RNA sequencing of the testicular Thy1+ spermatogonia in Foxc2f/+ and Foxc2f/-;Ddx4-cre mice
 
Overall design We performed scRNA-seq on the whole testicular Thy1+ spermatogonia in Foxc2f/+ and Foxc2f/-;Ddx4-cre mice using the 10x Genomics Chromium platform.
 
Contributor(s) Jin C, Wang Z
Citation(s) 37610429
BioProject PRJNA727744
Submission date Jul 23, 2021
Last update date Sep 14, 2023
Contact name Cheng Jin
E-mail(s) jc8721@126.com
Organization name Chinese Academy of Medical Sciences
Street address dongdansantiao num5
City Beijing
State/province State...
ZIP/Postal code 100005
Country China
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (8)
GSM5469148 R21039008-F1-F1-1
GSM5469149 R21039008-F1-F1-2
GSM5469150 R21039008-F1-F1-3
Relations
SRA SRP318713

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE180729_cKO.barcodes.tsv.gz 79.6 Kb (ftp)(http) TSV
GSE180729_cKO.features.tsv.gz 272.8 Kb (ftp)(http) TSV
GSE180729_cKO.matrix.mtx.gz 165.8 Mb (ftp)(http) MTX
GSE180729_control.barcodes.tsv.gz 80.4 Kb (ftp)(http) TSV
GSE180729_control.features.tsv.gz 272.8 Kb (ftp)(http) TSV
GSE180729_control.matrix.mtx.gz 178.8 Mb (ftp)(http) MTX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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