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Series GSE180252 Query DataSets for GSE180252
Status Public on Dec 16, 2021
Title ChIP-seq and RNA-seq of Human progenitor epidermal keratinocytes (HPEK) and HaCaT cells
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 34908107
Submission date Jul 16, 2021
Last update date Dec 18, 2021
Contact name Daizo Koinuma
E-mail(s) d-koinuma@umin.ac.jp
Organization name University of Tokyo
Department Pathology
Street address Hongo 7-3-1, Bunkyo-ku
City Tokyo
ZIP/Postal code 113-0033
Country Japan
 
Platforms (3)
GPL10999 Illumina Genome Analyzer IIx (Homo sapiens)
GPL17301 Ion Torrent PGM (Homo sapiens)
GPL17303 Ion Torrent Proton (Homo sapiens)
Samples (11)
GSM5456669 Smad3 binding region in differentiated HPEK cells stimulated with TGF-beta
GSM5456670 control genomic data in HPEK cells
GSM5456671 differentiated HPEK, unstimulated control
This SuperSeries is composed of the following SubSeries:
GSE180250 Smad3 binding regions in differentiated human progenitor epidermal keratinocytes (HPEK).
GSE180251 RNA-seq in human progenitor epidermal keratinocytes (HPEK) stimulated with TGF-beta.
GSE189303 Smad3 binding regions in human epidermal keratinocytes (HaCaT).
Relations
BioProject PRJNA747267

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE180252_RAW.tar 714.6 Mb (http)(custom) TAR (of BED, BEDGRAPH)
SRA Run SelectorHelp

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