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Series GSE179988 Query DataSets for GSE179988
Status Public on Jul 14, 2022
Title Epigenetic consequences of DMSO treatment on the HepaRG cell line
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary DMSO treatment of HepaRG cells during differentiation
 
Overall design The study contains ChIP-seq data in 2 replicates for H3K4me1, H3K4me3 and H3K27ac for HepaRG cells differentiated for 30 days with or without the presence of DMSO
 
Contributor(s) Kattler K
Citation(s) 35892596
Submission date Jul 13, 2021
Last update date Aug 03, 2022
Contact name Kathrin Kattler-Lackes
E-mail(s) Kathrin.Kattler@uni-saarland.de
Phone 06813022443
Organization name Saarland University
Department Epigenetics
Street address Campus A2.4 Raum 0.13
City Saarbrücken
State/province non-US Resident
ZIP/Postal code 66123
Country Germany
 
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (12)
GSM5444542 HepaRG d30 control H3K27ac Rep1
GSM5444543 HepaRG d30 control H3K27ac Rep2
GSM5444544 HepaRG d30 control H3K4me1 Rep1
Relations
BioProject PRJNA746146
SRA SRP328139

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE179988_RAW.tar 2.7 Gb (http)(custom) TAR (of BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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