|
| Status |
Public on Apr 04, 2022 |
| Title |
Differential gene expression in C. auris in presence of pyrvinium pamoate |
| Organism |
Candidozyma auris |
| Experiment type |
Expression profiling by high throughput sequencing
Other
|
| Summary |
PAT-seq approach was utilised to determine the gene expression in the the transcriptome of C. auris treated with the vehicle DMSO or drug pyrvvinium pamoate (PP). Biological triplicates of C. auris cultures grown in RPMI medium with either DMSO or 1uM PP for 30 minutes at 37 Celsius were havested and total RNA was isolated using standard procedures (hot phenol method).
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| |
|
| Overall design |
Analysis of poly(A) dynamics in C. auris
|
| |
|
| Contributor(s) |
Traven A, Simm C, Harrrison PF, Beilharz TH |
| Citation(s) |
35412372 |
| |
| Submission date |
Jun 08, 2021 |
| Last update date |
May 05, 2022 |
| Contact name |
Traude Beilharz |
| E-mail(s) |
traude.beilharz@monash.edu
|
| Organization name |
Monash University
|
| Department |
Biomedicine Discovery Institute
|
| Lab |
RNA Systems Biology Laboratory
|
| Street address |
Wellington Rd
|
| City |
Clayton |
| State/province |
VIC |
| ZIP/Postal code |
3800 |
| Country |
Australia |
| |
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| Platforms (1) |
| GPL30240 |
Illumina HiSeq 3000 ([Candida] auris) |
|
| Samples (6)
|
|
| Relations |
| BioProject |
PRJNA735943 |
| SRA |
SRP323189 |
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