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Series GSE175805 Query DataSets for GSE175805
Status Public on May 29, 2024
Title Single cell sequencing to investigate the alteration of urea cycle in DFMO treated mouse
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Single cell sequencing to investigate the alteration of urea cycle in DFMO treated mouse
Overall design We incubated 2*10^5 MC38 cells into the back of C57BL/6 mouse. And 7 days after incubation, we started gavage of DFMO or water(NC) daily for 14 days. Xenograft tumors were collected and digested into single cells, followed by Ficoll seperation to obtain immune cells. We mix cells from xenografts of 4 mice per group for single cell sequence.
Contributor(s) Lu S, Tong T
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Submission date May 30, 2021
Last update date May 29, 2024
Contact name Haoyan Chen
Organization name Renji Hospital
Street address 145 Shandong Road
City Shanghai
State/province Shanghai
ZIP/Postal code 200001
Country China
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (2)
GSM5348290 Xenograft tumor-DFMO-scRNA-seq
GSM5348291 Xenograft tumor-Water-scRNA-seq
BioProject PRJNA733773
SRA SRP321926

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE175805_barcodes.tsv.gz 110.6 Kb (ftp)(http) TSV
GSE175805_genes.tsv.gz 930.6 Kb (ftp)(http) TSV
GSE175805_matrix.mtx.gz 69.7 Mb (ftp)(http) MTX
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Raw data are available in SRA
Processed data are available on Series record

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