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Series GSE175779 Query DataSets for GSE175779
Status Public on May 29, 2021
Title Characterization of the SARS-CoV-2 Host Response in Primary Human Airway Epithelial Cells from Aged Individuals
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) is the causative agent of coronavirus disease 2019 (COVID-19), a global pandemic characterized by respiratory illness and an exaggerated immune response. Age (>60 years) is a significant risk factor for developing severe COVID-19. However, the underlying mechanisms of how aging impacts SARS-CoV-2 infection and the host response are largely unknown. Therefore, we performed an in vitro study to characterize the host response to SARS-CoV-2 infection using primary human bronchial epithelial cells from donors >67 years of age differentiated on air-liquid interface culture. We demonstrate that SARS-CoV-2 infection leads to early induction of a proinflammatory response and a delayed interferon response. In addition, we observe changes in genes and pathways associated with cell death and senescence throughout infection. In summary, our study provides important insights into the temporal kinetics of the airway epithelial innate immune response to SARS-CoV-2 in older individuals.
 
Overall design mRNA profiling of primary human bronchial epithelial cells (HBECs) from normal, nonsmoker, aged individuals (>67 years old) either uninfected or infected with SARS-CoV-2 as a function of time post-infection (24, 48, 72 and 96 hr)
 
Contributor(s) Walters MS
Citation(s) 34452468
Submission date May 28, 2021
Last update date Sep 08, 2021
Contact name Jonathan Wren
E-mail(s) Jonathan-Wren@omrf.org
Phone (405) 271-6989
Organization name OMRF
Department Genes & Human Disease Research Program
Street address 825 N.E. 13th Street
City Oklahoma City
State/province OK
ZIP/Postal code 73104
Country USA
 
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (36)
GSM5346220 t_0_uninfected_S1
GSM5346221 t_24hr_uninfected_S2
GSM5346222 t_48hr_uninfected_S3
Relations
BioProject PRJNA733520
SRA SRP321826

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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE175779_Raw_counts_matrix.txt.gz 1.1 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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