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Series GSE174667 Query DataSets for GSE174667
Status Public on Sep 10, 2021
Title MARCO+ lymphatic endothelial cells sequester arthritogenic alphaviruses in the draining lymph node and limit viral dissemination
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary While viremia in the vertebrate host is a critical determinant of arboviral reservoir competency, transmission efficiency, and disease severity, immune mechanisms that control arboviral viremia are poorly defined. Here, we identify critical roles for the scavenger receptor MARCO in controlling viremia during arthritogenic alphavirus infections in mice. Following subcutaneous inoculation, alphavirus particles drain via the lymph and are rapidly captured by MARCO+ lymphatic endothelial cells (LECs) in the draining lymph node (dLN), limiting viral spread to the bloodstream. Upon reaching the bloodstream, MARCO-expressing Kupffer cells in the liver remove circulating alphavirus particles, limiting viremia and further viral dissemination. MARCO-mediated accumulation of alphavirus particles in the lymph node and liver has important implications as viremia and viral tissue burdens are elevated in MARCO-/- mice and disease outcomes are more severe. These findings uncover a previously unrecognized pathogen scavenging role for LECs and improve our mechanistic understanding of viremia control during arboviral infections.
 
Overall design Identification of cells harboring CHIKV RNA using single-cell RNA sequencing.
Web link https://github.com/rnabioco/morrison-chikv
 
Contributor(s) Carpentier KS, Sheridan RM, Lucas CJ, Hesselberth JR, Morrison TE
Citation(s) 34618370
NIH grant(s)
Grant ID Grant title Affiliation Name
R01 AI141436 Impairment of B cell Responses by Pathogenic Chikungunya Viruses UNIVERSITY OF COLORADO DENVER THOMAS E MORRISON
R01 AI148144 Clearance of Blood-Borne Arboviruses UNIVERSITY OF COLORADO DENVER THOMAS E MORRISON
F32 AI140567 Viral and Host Determinants of Chikungunya Virus Dissemination UNIVERSITY OF COLORADO DENVER Kathryn Semmens Carpentier
F32 AI122463 Mechanisms of adaptive immune suppression during pathogenic chikungunya virus infection UNIVERSITY OF COLORADO DENVER Mary Katherine McCarthy
T32 AI007405 Training Program in Immunology UNIVERSITY OF COLORADO DENVER Ross M Kedl
T32 AI074491 Molecular Mechanisms of Immune Tolerance NATIONAL JEWISH HEALTH Roberta Pelanda
R35 GM119550 Biology of RNA damage and repair UNIVERSITY OF COLORADO DENVER Jay R Hesselberth
Submission date May 18, 2021
Last update date Sep 23, 2023
Contact name Jay R. Hesselberth
E-mail(s) jay.hesselberth@cuanschutz.edu
Organization name University of Colorado School of Medicine
Department Biochemistry and Molecular Gentetics
Lab Jay Hesselberth
Street address 12801 E 17TH AVE
City Aurora
State/province CO
ZIP/Postal code 80045
Country USA
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (6)
GSM5322182 mock-1
GSM5322183 mock-2
GSM5322184 mock-3
Relations
BioProject PRJNA730926
SRA SRP320410

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE174667_RAW.tar 781.6 Mb (http)(custom) TAR (of MTX, TSV)
GSE174667_morrison_count_matrix.tsv.gz 160.7 Mb (ftp)(http) TSV
GSE174667_morrison_metadata.tsv.gz 2.7 Mb (ftp)(http) TSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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