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Series GSE174103 Query DataSets for GSE174103
Status Public on May 09, 2023
Title Spatiotemporal resolution of germinal center Tfh cell differentiation and divergence from central memory CD4+ T cell fate
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Transcriptome analysis of CD4+ T cells responding to influenza infection.
 
Overall design Purified naïve OT-II T cells were transferred into CD45.1+ SMARTA recipient mice followed by intranasal infection with PR8-OVA. The donor OT-II cells from the medLN of the recipient mice were analyzed by RNA-seq at day 21 p.i.
Web link https://www.nature.com/articles/s41467-023-39299-3
 
Contributor(s) McMonigle RJ, Zhu F, Sialer DO, Greer BD, Gonzalez Avalos E, Hu H
Citation(s) 37330549
Submission date May 08, 2021
Last update date Aug 08, 2023
Contact name Fangming Zhu
E-mail(s) fmzhu@uab.edu
Organization name University of Alabama at Birmingham
Department Microbiology
Lab Hui Hu
Street address 845 19th Street South
City Birmingham
State/province AL
ZIP/Postal code 35294
Country USA
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (10)
GSM5287283 naïve T cells rep1
GSM5287284 naïve T cells rep2
GSM5287285 Non-Tfh cells_day 21_rep1
This SubSeries is part of SuperSeries:
GSE174104 Spatiotemporal resolution of germinal center Tfh cell differentiation and divergence from central memory CD4+ T cell fate
Relations
BioProject PRJNA728301
SRA SRP318995

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE174103_pr8_rna_seq_normalized_counts.csv.gz 749.5 Kb (ftp)(http) CSV
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Raw data are available in SRA
Processed data are available on Series record

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