|
| Status |
Public on May 08, 2021 |
| Title |
in situ HiC in Smchd1-GFP NSCs |
| Organism |
Mus musculus |
| Experiment type |
Other
|
| Summary |
in situ HiC to assess chromatin conformation in Smchd1-GFPMD43/MD43 and Smchd1-GFP+/+ neural stem cells.
|
| |
|
| Overall design |
3 independent cell lines for each genotype were derived from E14.5 embryos' cortices and cultured for less than 10 passages to be used as biological replicates. One cell line of each genotype was used for the whole cell extract samples.
|
| |
|
| Contributor(s) |
Tapia del Fierro A, Blewitt M |
| Citation(s) |
37749075 |
| |
| Submission date |
May 07, 2021 |
| Last update date |
Oct 03, 2023 |
| Contact name |
Andres Tapia del Fierro |
| E-mail(s) |
tapia.a@wehi.edu.au
|
| Phone |
+61393452914
|
| Organization name |
WEHI
|
| Department |
EDD
|
| Lab |
Blewitt lab
|
| Street address |
1G Royal Parade
|
| City |
Melbourne |
| State/province |
Victoria |
| ZIP/Postal code |
3052 |
| Country |
Australia |
| |
|
| Platforms (1) |
| GPL19057 |
Illumina NextSeq 500 (Mus musculus) |
|
| Samples (6)
|
|
| This SubSeries is part of SuperSeries: |
| GSE174113 |
SMCHD1 has separable roles in chromatin architecture and gene silencing that could be targeted in disease |
|
| Relations |
| BioProject |
PRJNA728119 |
| SRA |
SRP318930 |
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