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Series GSE173979 Query DataSets for GSE173979
Status Public on Jul 20, 2021
Title Transcriptional profile (RNA-seq) of cultured astrocytes [RegionAstro]
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Purpose of the study is to compare the transcriptional profiles of astrocytes obtained from cortex gray matter and spinal cord of postnatal mice.
Overall design Astrocytes were isolated from 2 regions via ACSA-2 sorting, cultured for 7 days and then subjected to RNA-seq
Contributor(s) Masserdotti G, Hersbach BA, Knelles K
Citation(s) 34289357
Submission date May 06, 2021
Last update date Aug 11, 2021
Contact name Pawel Smialowski
Organization name Helmholtz Zentrum Muenchen
Street address Ingolstädter Landstraße 1
City Neuherberg
ZIP/Postal code D-85764
Country Germany
Platforms (1)
GPL18480 Illumina HiSeq 1500 (Mus musculus)
Samples (22)
GSM5283882 spinal cord-culture-1 [AAATAC]
GSM5283883 cortex-acute-1 [AAGTAT]
GSM5283884 spinal cord-acute-1 [AATAGT]
BioProject PRJNA727799
SRA SRP318741

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SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE173979_Regional_astrocytes_BD_normCounts.txt.gz 1.9 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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