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Series GSE173385 Query DataSets for GSE173385
Status Public on May 16, 2022
Title Single-cell RNA-seq of UVB-radiated Skin Reveals Landscape of Photoaging-related Inflammation and Protection by Vitamin D
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Due to the destruction of the ozone layer, the ultraviolet radiation received by our skin has increased significantly. Continuous exposure to sunlight can cause damage to our skin, which can lead to photoaging and even skin cancer. We performed single-cell RNA sequencing on the skin of normal and UV-irradiated mice, and found that UV-irradiation caused an inflammatory response in the skin of mice. On the contrary, the inflammation of the mice injected with vitamin D was significantly reduced. Finally, we uncovered that Hmox1 and vitamin D is related to achieve the anti-inflammatory effect of vitamin D. This provides a strategy for skin anti-UV treatment
 
Overall design Single cell sequencing of 9 weeks old normal and UV-irradiated mice
 
Contributor(s) Lin Y, Cao Z, Zheng J, Lv T
Citation(s) 35577040
Submission date Apr 27, 2021
Last update date Jul 17, 2023
Contact name Yuanbin Lin
E-mail(s) linyuanbin@nimte.ac.cn
Phone +86 15098935882
Organization name Shanghai University
Street address 99 Shangda Road, Baoshan District, Shanghai
City Shanghai
ZIP/Postal code 200444
Country China
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (3)
GSM5266942 Control
GSM5266943 UV
GSM5266944 VD
Relations
BioProject PRJNA725401
SRA SRP316525

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE173385_RAW.tar 40.5 Mb (http)(custom) TAR (of TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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