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Series GSE171812 Query DataSets for GSE171812
Status Public on Nov 03, 2021
Title Maladaptive functional changes in alveolar fibroblasts due to perinatal hyperoxia impair epithelial differentiation
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary PDGFRa+ matrix and myofibroblasts decrease and PDGFRa+ lipofibroblasts increase during hyperoxia injury at both a transcriptional and population level.
 
Overall design MACS-sorted PDGFRa+ (CD140+) FBs from either RA or O2 PN4, PN7, and PN10 mouse lungs were prepared for bulk RNA-seq.
 
Contributor(s) Riccetti M, Snowball J, Per AT
Citation(s) 35113810
Submission date Apr 09, 2021
Last update date Jun 10, 2022
Contact name John M. Snowball
E-mail(s) snowballdbs@yahoo.com
Phone 8594090321
Organization name Cincinnati Childrens Hospital
Department Pulmonary Research
Lab Whitsett
Street address 3333 Burnet Ave
City Cincinnati
State/province OH
ZIP/Postal code 45229
Country USA
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (18)
GSM5234590 SA2017_109
GSM5234591 SA2017_110
GSM5234592 SA2017_111
Relations
BioProject PRJNA720949
SRA SRP314252

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE171812_FPKM_processed_data.txt.gz 1.5 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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