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Series GSE171501 Query DataSets for GSE171501
Status Public on Apr 06, 2021
Title RORa is required for neutrophil migration
Organism Danio rerio
Experiment type Expression profiling by high throughput sequencing
Summary We performed RNAseq to identify mRNAs that were specifically down regulated in neutrophils when RORa function is inhibited
 
Overall design For RORa target identification we sequenced messenger RNAs in zebrafish neutrophils over expressing a dominant RORa or mcherry control
 
Contributor(s) Hsu AY, Deng Q, Liu S, Wan J
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Apr 05, 2021
Last update date Apr 06, 2021
Contact name Qing Deng
E-mail(s) qingdeng@purdue.edu
Phone 765-494-0423
Organization name Purdue University
Department Department of Biological Sciences
Street address 915 W. State Street
City West Lafayette
State/province Indiana
ZIP/Postal code 47907
Country USA
 
Platforms (1)
GPL24995 Illumina NovaSeq 6000 (Danio rerio)
Samples (6)
GSM5226358 mCherry-1
GSM5226359 mCherry-2
GSM5226360 mCherry-3
Relations
BioProject PRJNA719817
SRA SRP313536

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SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE171501_DengQing_6199_expression.xlsx 5.3 Mb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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