GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Series GSE167229
Query DataSets for GSE167229
Status
Public on Aug 30, 2021
Title
Evolutionary rewiring of wheat abiotic stress responsive network by lineage-specific transposable elements
Organism
Triticum urartu
Experiment type
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Methylation profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
34503979
Submission date
Feb 22, 2021
Last update date
Nov 30, 2021
Contact name
yijing zhang
E-mail(s)
zhangyijing@fudan.edu.cn
Organization name
Fudan University
Department
Biochemistry
Lab
Functional Epigenomics Group
Street address
2005 Songhu Road
City
shanghai
ZIP/Postal code
200438
Country
China
Platforms (2)
GPL29754
Illumina NovaSeq 6000 (Triticum urartu)
GPL29755
HiSeq X Ten (Triticum urartu)
Samples (146)
Less...
More...
GSM5099901
AP2-DREB-1
GSM5099902
AP2-DREB-18
GSM5099903
AP2-DREB-19
GSM5099904
AP2-DREB-21
GSM5099905
AP2-DREB-7
GSM5099906
AP2-DREB-8
GSM5099907
AP2-DREB-9
GSM5099908
AP2-ERF-13
GSM5099909
AP2-ERF-23
GSM5099910
AP2-RAV-26
GSM5099911
bHLH10
GSM5099912
bHLH11
GSM5099913
bZIP10
GSM5099914
bZIP17
GSM5099915
bZIP2
GSM5099916
bZIP20
GSM5099917
bZIP7
GSM5099918
C2H2-4
GSM5099919
GARP5
GSM5099920
HB-HD-ZIP-2
GSM5099921
HB-HD-ZIP-6
GSM5099922
HSF1
GSM5099923
MYB11
GSM5099924
MYB13
GSM5099925
MYB17
GSM5099926
MYB19
GSM5099927
MYB26
GSM5099928
MYB27
GSM5099929
MYB31
GSM5099930
NAC14
GSM5099931
NAC15
GSM5099932
NAC17
GSM5099933
NAC18
GSM5099934
NAC2
GSM5099935
NAC26
GSM5099936
NAC29
GSM5099937
NAC4
GSM5099938
Trihelix1
GSM5099939
WRKY10
GSM5099940
WRKY11
GSM5099941
WRKY12
GSM5099942
WRKY13
GSM5099943
WRKY15
GSM5099944
WRKY16
GSM5099945
WRKY18
GSM5099946
WRKY19
GSM5099947
WRKY20
GSM5099948
WRKY21
GSM5099949
WRKY30
GSM5099950
WRKY5
GSM5099951
WRKY8
GSM5099952
ZFHD1
GSM5099953
ZFHD2
GSM5099954
Halo_rep1
GSM5099955
Halo_rep2
GSM5099956
Halo_rep3
GSM5099957
AP2-14
GSM5099958
AP2-15
GSM5099959
B3-10
GSM5099960
bHLH12
GSM5099961
bHLH13
GSM5099962
bHLH14
GSM5099963
bHLH16
GSM5099964
bHLH2
GSM5099965
bHLH5
GSM5099966
bHLH7
GSM5099967
bZIP1
GSM5099968
bZIP11
GSM5099969
bZIP3
GSM5099970
bZIP4
GSM5099971
bZIP5
GSM5099972
bZIP8
GSM5099973
C2C2-1
GSM5099974
C2C2-2
GSM5099975
C2C2-3
GSM5099976
C2C2-4
GSM5099977
C2C2-5
GSM5099978
C3H-1
GSM5099979
C3H-2
GSM5099980
C3H-5
GSM5099981
GARP2
GSM5099982
GARP6
GSM5099983
GARP-G2-1
GSM5099984
GRAS2
GSM5099985
HB-HD-ZIP-3
GSM5099986
LOB2
GSM5099987
LOB3
GSM5099988
LOB5
GSM5099989
MYB12
GSM5099990
MYB14
GSM5099991
MYB15
GSM5099992
MYB16
GSM5099993
MYB18
GSM5099994
MYB2
GSM5099995
MYB20
GSM5099996
MYB21
GSM5099997
MYB22
GSM5099998
MYB23
GSM5099999
MYB24
GSM5100000
MYB30
GSM5100001
MYB32
GSM5100002
MYB33
GSM5100003
MYB34
GSM5100004
MYB36
GSM5100005
MYB6
GSM5100006
NAC1
GSM5100007
NAC10
GSM5100008
NAC11
GSM5100009
NAC12
GSM5100010
NAC13
GSM5100011
NAC22
GSM5100012
NAC23
GSM5100013
NAC24
GSM5100014
NAC27
GSM5100015
NAC8
GSM5100016
NAC9
GSM5100017
NF-YC-1
GSM5100018
SBP3
GSM5100019
WRKY14
GSM5100020
G1812_ChIPseq_H3K27me3
GSM5100021
G1812_ChIPseq_H3K27me3_ABA
GSM5100022
G1812_ChIPseq_H3K9ac
GSM5100023
G1812_ChIPseq_H3K4me3
GSM5100024
G1812_DNaseseq_DHS_rep1
GSM5100025
G1812_DNaseseq_DHS_rep2
GSM5100026
G1812_Bisulphiteseq_DNAmeth
GSM5100027
G1812_RNAseq_G1812_CK_rep1
GSM5100028
G1812_RNAseq_G1812_CK_rep2
GSM5100029
G1812_RNAseq_G1812_ABA_rep1
GSM5100030
G1812_RNAseq_G1812_ABA_rep2
GSM5100031
G1812_RNAseq_G1812_CK_rep3
GSM5100032
G1812_RNAseq_G1812_CK_rep4
GSM5100033
G1812_RNAseq_G1812_salt_rep1
GSM5100034
G1812_RNAseq_G1812_salt_rep2
GSM5100035
G1812_RNAseq_G1812_drought_rep1
GSM5100036
G1812_RNAseq_G1812_drought_rep2
GSM5100037
G1812_RNAseq_G1812_CK_rep5
GSM5100038
G1812_RNAseq_G1812_CK_rep6
GSM5100039
G1812_RNAseq_G1812_cold_rep1
GSM5100040
G1812_RNAseq_G1812_cold_rep2
GSM5100041
G1812_RNAseq_G1812_heat_rep1
GSM5100042
G1812_RNAseq_G1812_heat_rep2
GSM5100043
G1812_RNAseq_G1812_wounding_rep1
GSM5100044
G1812_RNAseq_G1812_wounding_rep2
GSM5534764
G1812_ChIPseq_H3K4me3_ABA
GSM5534765
G1812_ChIPseq_AP2-DREB-7
This SuperSeries is composed of the following SubSeries:
GSE167227
Evolutionary rewiring of wheat abiotic stress responsive network by lineage-specific transposable elements [DAP-Seq]
GSE167228
Evolutionary rewiring of wheat abiotic stress responsive network by lineage-specific transposable elements I
GSE182693
Evolutionary rewiring of wheat abiotic stress responsive network by lineage-specific transposable elements [ChIP-Seq]
Relations
BioProject
PRJNA703958
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE167229_RAW.tar
22.4 Gb
(http)
(custom)
TAR (of BW, TXT, XLS)
SRA Run Selector
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|