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Series GSE165762 Query DataSets for GSE165762
Status Public on Jan 30, 2021
Title Transcriptional Signatures Predict Phenotypic Variations of Candida auris
Organism [Candida] auris
Experiment type Expression profiling by high throughput sequencing
Summary Transcriptomic analysis of different Candida auris clinical isolates with distinct antifungal susceptibility profiles.
Overall design RNA-sequencing was performed of the following C. auris clinical isolates: 470140, 4710147, 470154 and CBS10913 provided by Rajendra Prasad and Arunoloke Chakraborti. Cells were grown to the exponential phase in YPD at 37 °C. Cultures were then harvested for RNA isolation. Three biological replicates for each isolate were sequenced.
Contributor(s) Jenull S, Kuchler K, Shivarathri R, Chauhan N
Citation(s) 33937102
Submission date Jan 29, 2021
Last update date Sep 15, 2021
Contact name Sabrina Jenull
Organization name Max Perutz Labs
Lab Kuchler
Street address Dr. Bohrgasse 9/2
City Vienna
ZIP/Postal code 1030
Country Austria
Platforms (1)
GPL29671 Illumina HiSeq 2500 ([Candida] auris)
Samples (12)
GSM5049596 470140_repl1
GSM5049597 470140_repl2
GSM5049598 470140_repl3
BioProject PRJNA697848
SRA SRP303800

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Supplementary file Size Download File type/resource
GSE165762_Raw_counts.txt.gz 156.0 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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