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Series GSE165388 Query DataSets for GSE165388
Status Public on Aug 10, 2021
Title Interneuron origin and molecular diversity in the human fetal brain
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary GABAergic inhibitory neurons are crucial in maintaining the stability of neural circuits through synaptic inhibition in the human brain. In this study, we used single-cell RNA sequencing to profile the transcriptomes of fetal cells collected along an early developmental time course to clarify the origin and diversification of interneurons. The heterogeneity of interneurons within the human subpallium is observed in ganglionic eminence precursors and driven by a string of gene regulatory networks that exhibit evident differences in the subventricular zone during the late first trimester. We identified conserved molecular signatures between the cardinal interneuron subtypes of ganglionic eminence precursors and adult interneurons through comparing embryonic and mature cortex data sets.
 
Overall design Single cell sequencing of human fetal subpallium
 
Contributor(s) Yu Y, Sun T
Citation(s) 34737447
Submission date Jan 23, 2021
Last update date Nov 14, 2021
Contact name yuan yu
E-mail(s) yuyuan@stu.hqu.edu.cn
Organization name HuaQiao university
Department Center for precision medicine
Lab TAOSUN
Street address JiMei Street, 668
City XiaMen
State/province FuJian
ZIP/Postal code 361021
Country China
 
Platforms (1)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (4)
GSM5032680 subpallium of gestational week 9
GSM5032681 subpallium of gestational week 10
GSM5032682 subpallium of gestational week 11
Relations
BioProject PRJNA694306
SRA SRP302973

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE165388_RAW.tar 330.5 Mb (http)(custom) TAR (of MTX, TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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