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Series GSE165299 Query DataSets for GSE165299
Status Public on Jan 23, 2021
Title Next Generation Sequencing Facilitates Quantitative Analysis of lung resident cells cell Transcriptomes
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary To examine reaction in lung residential cells to influenza viral infection, lung epithelial cells (AEC), clara cells, DC, Mast cells, macrophages, eosinophil, and neutrophils were isolated from lung of mice infected with influenza viruses at 3 day postinfection.
Overall design AEC, Clara cells, DC, Mast cells, macrophages, eosinophil, and neutrophils of mice lung were sorted and analyzed the transcriptome using Illumina HiSeq1500.
Contributor(s) Kubo M
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Submission date Jan 22, 2021
Last update date Jan 25, 2021
Contact name Kosuke Miyauchi
Organization name RIKEN Center for Integrative Medical Sciences
Street address 1-7-22 Suehiro-sho
City Yokohama
State/province Kanagawa
ZIP/Postal code 230-0045
Country Japan
Platforms (1)
GPL18480 Illumina HiSeq 1500 (Mus musculus)
Samples (43)
GSM5029623 CD103+ cDC PBS1
GSM5029624 CD103+ cDC PBS2
GSM5029625 CD103+ cDC PBS3
BioProject PRJNA694034
SRA SRP302839

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE165299_RAW.tar 5.2 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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