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Series GSE165062 Query DataSets for GSE165062
Status Public on Dec 01, 2021
Title Gene expression microarray analysis of whole mouse hamstring muscles to identify genes promoting the devlopment of neurogenic heterotopic ossifications following spinal cord injury
Organism Mus musculus
Experiment type Expression profiling by array
Summary To better understand which genes/pathways are activated in injured muscles following a spinal cord injury (SCI) and how these promote the development of neurogenic heterotopic ossification (NHO), we performed gene expression profiling by microarray of muscles in the early phase following muscle injury.
 
Overall design Total RNA was isolated from injured hamstring muscles two days post-injury from four experimental groups: 1) Spinal cord injury (SCI) + cardiotoxin (CDTX): SCI plus intramuscular (i.m.) CDTX injection, the only condition in which NHOs form in the injured muscle; 2) SCI+Saline: SCI surgery plus i.m. injection of saline); 3) Sham+CDTX: Sham surgery plus i.m. injection of CDTX, ; or 4) Sham+Saline.
 
Contributor(s) Tseng H, Kulina I, Thomas G, Wheeler L, Levesque J
Citation(s) 34841579
Submission date Jan 19, 2021
Last update date Mar 02, 2022
Contact name Jean-Pierre Levesque
E-mail(s) jp.levesque@mater.uq.edu.au
Organization name Mater Research Institute-University of Queensland
Department Mater Research Institute
Lab Levesque lab
Street address 37 Kent St
City Brisbane
State/province Queensland
ZIP/Postal code 4102
Country Australia
 
Platforms (1)
GPL6885 Illumina MouseRef-8 v2.0 expression beadchip
Samples (16)
GSM5025527 mouse_SCI+CDTX_1
GSM5025528 mouse_SCI+CDTX_2
GSM5025529 mouse_SCI+CDTX_3
Relations
BioProject PRJNA693157

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE165062_RAW.tar 17.7 Mb (http)(custom) TAR (of IDAT)
GSE165062_matrix_non_normalized_AllSamples.txt.gz 6.8 Mb (ftp)(http) TXT
GSE165062_matrix_normalized_AllSamples.txt.gz 4.9 Mb (ftp)(http) TXT
GSE165062_matrix_normalized_final.txt.gz 5.4 Mb (ftp)(http) TXT
Processed data included within Sample table
Processed data are available on Series record

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