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GEO accession:
Series GSE164738
Query DataSets for GSE164738
Status
Public on Jul 31, 2021
Title
Chromatin remodeling and expression dynamics reveal conserved and species-specific regulation during mouse and chicken limb development
Organisms
Gallus gallus
;
Mus musculus
Experiment type
Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
34584102
Submission date
Jan 13, 2021
Last update date
Oct 27, 2021
Contact name
Shalu Jhanwar
E-mail(s)
shalu.jhanwar@unibas.ch
Organization name
University of Basel
Department
Department of Biomedicine
Street address
Mattenstrasse 28
City
Basel
ZIP/Postal code
4058
Country
Switzerland
Platforms (2)
GPL19057
Illumina NextSeq 500 (Mus musculus)
GPL19787
Illumina NextSeq 500 (Gallus gallus)
Samples (30)
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More...
GSM5017891
ATAC-seq forelimb bud E9.75 replicate 1
GSM5017892
ATAC-seq forelimb bud E9.75 replicate 2
GSM5017893
ATAC-seq forelimb bud E10.5 replicate 1 [re-analysis]
GSM5017894
ATAC-seq forelimb bud E10.5 replicate 2 [re-analysis]
GSM5017895
ATAC-seq forelimb bud E11.5 replicate 1 [re-analysis]
GSM5017896
ATAC-seq forelimb bud E11.5 replicate 2 [re-analysis]
GSM5017897
ATAC-seq wing bud HH20 replicate 1
GSM5017898
ATAC-seq wing bud HH20 replicate 2
GSM5017899
ATAC-seq wing bud HH22 replicate 1
GSM5017900
ATAC-seq wing bud HH22 replicate 2
GSM5017901
ATAC-seq wing bud HH24 replicate 1
GSM5017902
ATAC-seq wing bud HH24 replicate 2
GSM5017903
RNA-seq FL bud E9.75 replicate 1
GSM5017904
RNA-seq FL bud E9.75 replicate 2
GSM5017905
RNA-seq FL bud E9.75 replicate 3
GSM5017906
RNA-seq FL bud E10.5 replicate 1
GSM5017907
RNA-seq FL bud E10.5 replicate 2
GSM5017908
RNA-seq FL bud E10.5 replicate 3
GSM5017909
RNA-seq FL bud E11.5 replicate 1
GSM5017910
RNA-seq FL bud E11.5 replicate 2
GSM5017911
RNA-seq FL bud E11.5 replicate 3
GSM5017912
RNA-seq WB HH20 replicate 1
GSM5017913
RNA-seq WB HH20 replicate 2
GSM5017914
RNA-seq WB HH20 replicate 3
GSM5017915
RNA-seq WB HH22 replicate 1
GSM5017916
RNA-seq WB HH22 replicate 2
GSM5017917
RNA-seq WB HH22 replicate 3
GSM5017918
RNA-seq WB HH24 replicate 1
GSM5017919
RNA-seq WB HH24 replicate 2
GSM5017920
RNA-seq WB HH24 replicate 3
This SuperSeries is composed of the following SubSeries:
GSE164736
Chromatin remodeling and expression dynamics reveal conserved and species-specific regulation during mouse and chicken limb development [ATAC-seq]
GSE164737
Chromatin remodeling and expression dynamics reveal conserved and species-specific regulation during mouse and chicken limb development [RNA-seq]
Relations
BioProject
PRJNA691872
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE164738_RAW.tar
2.6 Gb
(http)
(custom)
TAR (of BW)
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