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Series GSE164456 Query DataSets for GSE164456
Status Public on Mar 02, 2024
Title Histone lysine demethylase 4 family proteins maintain the transcriptional program and adrenergic cellular state of MYCN-amplified neuroblastoma
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 38508144
Submission date Jan 08, 2021
Last update date Mar 24, 2024
Contact name Hongjian Jin
E-mail(s) hongjian.jin@STJUDE.ORG
Organization name St Jude Children's Research Hospital
Department Center for Applied Bioinformatics
Street address 262 Danny Thomas Place
City Memphis
State/province TN
ZIP/Postal code 38015
Country USA
 
Platforms (2)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (69)
GSM5009718 ATAC-seq_BE2C-ctrl-001
GSM5009719 ATAC-seq_BE2C-ctrl-002
GSM5009720 ATAC-seq_BE2C-QC-001
This SuperSeries is composed of the following SubSeries:
GSE164450 KDM4 inhibition disrupts the core regulatory transcriptional circuitry in MYCN-driven neuroblastoma [ATAC-seq]
GSE164451 KDM4 inhibition disrupts the core regulatory transcriptional circuitry in MYCN-driven neuroblastoma [ChIP-seq]
GSE164454 KDM4 inhibition disrupts the core regulatory transcriptional circuitry in MYCN-driven neuroblastoma [Cut&Tag]
Relations
BioProject PRJNA690781

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE164456_RAW.tar 12.2 Gb (http)(custom) TAR (of BED, BW, NARROWPEAK, TXT)
SRA Run SelectorHelp
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