|
| Status |
Public on Feb 01, 2021 |
| Title |
RNA sequencing of mouse podocytes with and without knockdown of Pdss2 |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We report trancriptional changes between wildtype mouse immortalized podocytes and compared to podocytes with shRNA-knockdown of Pdss2.
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| |
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| Overall design |
Bulk RNA sequencing of control and knockdown, n=3 biological replicates per condition, at day 14 of differentiation, 7 days following knockdown with scrambled- or Pdss2-targeted shRNAs. Two different validated Pdss2-targeted shRNAs were used.
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| |
|
| Contributor(s) |
Sidhom E, Greka A |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
Jan 05, 2021 |
| Last update date |
Apr 12, 2021 |
| Contact name |
Eriene-Heidi Sidhom |
| E-mail(s) |
eriene-heidi_sidhom@hms.harvard.edu
|
| Organization name |
Harvard Medical School
|
| Street address |
4 Blackfan Circle HIM 536
|
| City |
Boston |
| State/province |
MA |
| ZIP/Postal code |
02115 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL17021 |
Illumina HiSeq 2500 (Mus musculus) |
|
| Samples (9)
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| This SubSeries is part of SuperSeries: |
| GSE164274 |
Targeting a Braf/Mapk pathway rescues podocyte lipid peroxidation in CoQ deficiency kidney disease |
|
| Relations |
| BioProject |
PRJNA689782 |
| SRA |
SRP300445 |
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