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Series GSE164227 Query DataSets for GSE164227
Status Public on Mar 01, 2021
Title Small RNAseq of MV3 melanoma cells overexpressing MCPIP1 protein
Organism Homo sapiens
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary Sequencing of small RNAs in RNA samples from control cells, cells overexpressing wild-type and mutated form of MCPIP1 ribonuclease
 
Overall design 4 biological replicates of each sample (transfected with epty vector, overexpressing wild-type MCPIP1 and overexpressing point mutant,D141N, of MCPIP1 protein) were sequenced on an Ion Torrent TM Proton machine for assessment of miRNA profile differences
 
Contributor(s) Nowak I
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Jan 04, 2021
Last update date Mar 01, 2021
Contact name Iwona Nowak
E-mail(s) iwonka.nowak91@gmail.com
Phone 694094603
Organization name Jagiellonian University
Street address Kalwaryjska 92/5
City Kraków
ZIP/Postal code 30-504
Country Poland
 
Platforms (1)
GPL17303 Ion Torrent Proton (Homo sapiens)
Samples (12)
GSM5004270 MV31_C.IonXpressRNA_001
GSM5004271 MV32_C.IonXpressRNA_004
GSM5004272 MV33_C.IonXpressRNA_007
Relations
BioProject PRJNA689586
SRA SRP300242

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE164227_DE_miRNA_wt_c.xlsx 80.5 Kb (ftp)(http) XLSX
GSE164227_DE_miRNA_wt_c_d141n.xlsx 81.5 Kb (ftp)(http) XLSX
GSE164227_DE_miRNA_wt_d141n.xlsx 74.3 Kb (ftp)(http) XLSX
GSE164227_MV_miRNA.bcmatrix.xlsx 189.5 Kb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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