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| Status |
Public on Dec 23, 2023 |
| Title |
The epigenetic effects induced by ectopic expression of Pax7 in 3T3-L1 |
| Organism |
Mus musculus |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
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| Summary |
We report the robustness and plasticity of the differentiation potential of 3T3L1 adipocytes in the aspect of genome-wide change of chromatin structure by ectopic expression of Pax7 and classifying the genes potentially responsible for facilitating or suppressing trans-differentiation of 3T3L1 in the aspect of epigenetic regulation..
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| Overall design |
We performed RNA-seq and ChIP-seq in control or Pax7 stably expressed 3T3-L1 adipocytes during adipocyte differentiation.
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| Contributor(s) |
Elgaabari A, Miyawaki-Kuwakado A, Tomimatsu K, Wu Q, Izumi W, Suzuki T, Tokunaga K, Anderson JE, Tatsumi R, Ohkawa Y, Nakamura M |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
Dec 23, 2020 |
| Last update date |
Dec 23, 2023 |
| Contact name |
Yasuyuki Ohkawa |
| E-mail(s) |
yohkawa@bioreg.kyushu-u.ac.jp
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| Organization name |
Medical Institute of Bioregulation
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| Lab |
Division of Transcriptomics
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| Street address |
3-1-1 Maidashi
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| City |
Fukuoka |
| ZIP/Postal code |
8128582 |
| Country |
Japan |
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| Platforms (2) |
| GPL18480 |
Illumina HiSeq 1500 (Mus musculus) |
| GPL24247 |
Illumina NovaSeq 6000 (Mus musculus) |
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| Samples (28)
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| Relations |
| BioProject |
PRJNA687599 |
| SRA |
SRP299186 |
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