|
| Status |
Public on Sep 11, 2023 |
| Title |
HEY1-NCOA2 interacts with RUNX2 to induce mesenchymal chondrosarcoma |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by array
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
|
| |
|
| Citation(s) |
37212282 |
| |
| Submission date |
Dec 21, 2020 |
| Last update date |
Sep 12, 2023 |
| Contact name |
Takuro Nakamura |
| E-mail(s) |
takuro-ind@umin.net
|
| Phone |
81-3-3570-0462
|
| Organization name |
Japanese Foundation for Cancer Research
|
| Department |
The Cancer Institute
|
| Lab |
Carcinogenesis
|
| Street address |
3-8-31 Ariake, Koto-ku
|
| City |
Tokyo |
| ZIP/Postal code |
135-8550 |
| Country |
Japan |
| |
|
| Platforms (2) |
| GPL11180 |
[HT_MG-430_PM] Affymetrix HT MG-430 PM Array Plate |
| GPL16417 |
Illumina MiSeq (Mus musculus) |
|
| Samples (46)
|
| GSM4976721 |
eSZ HN2 1 |
| GSM4976722 |
eSZ HN2 2 |
| GSM4976723 |
eSZ HN2 3 |
| GSM4976724 |
HN2 C1 |
| GSM4976725 |
HN2 C5 |
| GSM4976726 |
HN2 C7 |
| GSM4976727 |
HN2 C15 |
| GSM4976728 |
HN2 C18 |
| GSM4976729 |
HN2 C20 |
| GSM4976730 |
HN2 C24 |
| GSM4976731 |
HN2 C26 |
| GSM4976732 |
HN2 C33 |
| GSM4976733 |
HN2 C34 |
| GSM4976734 |
HN2 C35 |
| GSM4976735 |
HN2 C5 shNTC 1 |
| GSM4976736 |
HN2 C5 shNTC 2 |
| GSM4976737 |
HN2 C5 shNTC 3 |
| GSM4976738 |
HN2 C5 shHEY1 1 |
| GSM4976739 |
HN2 C5 shHEY1 2 |
| GSM4976740 |
HN2 C5 shHEY1 3 |
| GSM4976741 |
HN2 C5 shRunx2 1 |
| GSM4976742 |
HN2 C5 shRunx2 2 |
| GSM4976743 |
HN2 C5 shRunx2 3 |
| GSM4976744 |
HN2 C24 shNTC 1 |
| GSM4976745 |
HN2 C24 shNTC 2 |
| GSM4976746 |
HN2 C24 shNTC 3 |
| GSM4976747 |
HN2 C24 shHEY1 1 |
| GSM4976748 |
HN2 C24 shHEY1 2 |
| GSM4976749 |
HN2 C24 shHEY1 3 |
| GSM4976750 |
HN2 C24 shRunx2 1 |
| GSM4976751 |
HN2 C24 shRunx2 2 |
| GSM4976752 |
HN2 C24 shRunx2 3 |
| GSM4982220 |
Mesenchymal chondrosarcoma, HEY1-NCOA2 |
| GSM4982221 |
Mesenchymal chondrosarcoma, K27Ac |
| GSM4982222 |
Mesenchymal chondrosarcoma, K27Me3 |
| GSM4982223 |
Mesenchymal chondrosarcoma, K4Me3 |
| GSM4982224 |
Mesenchymal chondrosarcoma, Runx2 |
| GSM4982225 |
Mesenchymal chondrosarcoma, Hey1 |
| GSM4982226 |
Mesenchymal chondrosarcoma, Input |
| GSM5952725 |
Mesenchymal chondrosarcoma, Runx3 |
| GSM5952726 |
Mesenchymal chondrosarcoma, HEY1-NCOA2 on Runx2 KO |
| GSM5952727 |
Mesenchymal chondrosarcoma, K27Ac on Runx2 KO |
| GSM5952728 |
Mesenchymal chondrosarcoma, Runx3 on Runx2 KO |
|
| This SuperSeries is composed of the following SubSeries: |
| GSE163291 |
HEY1-NCOA2 interacts with RUNX2 to induce mesenchymal chondrosarcoma [Array] |
| GSE163585 |
HEY1-NCOA2 interacts with RUNX2 to induce mesenchymal chondrosarcoma [ChIP-seq] |
|
| Relations |
| BioProject |
PRJNA686875 |
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