NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE162511 Query DataSets for GSE162511
Status Public on Jan 07, 2021
Title Single-cell transcriptome and 3D genome atlas of the developing mouse brain
Organisms Homo sapiens; Mus musculus
Experiment type Expression profiling by high throughput sequencing
Other
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 33484631
Submission date Dec 02, 2020
Last update date Apr 06, 2021
Contact name Longzhi Tan
E-mail(s) tanlongzhi@gmail.com
Organization name Harvard University
Department Chemistry and Chemical Biology
Lab Xiaoliang Sunney Xie
Street address 12 Oxford St
City Cambridge
State/province MA
ZIP/Postal code 02138
Country USA
 
Platforms (3)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (4314)
GSM4382149 Cortex P1 CASTxB6 Cell 001
GSM4382150 Cortex P1 CASTxB6 Cell 002
GSM4382151 Cortex P1 CASTxB6 Cell 003
This SuperSeries is composed of the following SubSeries:
GSE146397 Diploid chromatin conformation capture (Dip-C) of single cells from the developing mouse cortex and hippocampus
GSE162509 Multiple annealing and looping based amplification cycles for digital transcriptomics (MALBAC-DT) of single cells from the developing mouse cortex and hippocampus
GSE164203 Diploid chromatin conformation capture (Dip-C) of single cells from the developing visual cortex of dark-reared and control mice
Relations
BioProject PRJNA682106

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE162511_RAW.tar 183.3 Gb (http)(custom) TAR (of HIC, TXT)
SRA Run SelectorHelp

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap