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Series GSE161908 Query DataSets for GSE161908
Status Public on Nov 01, 2022
Title Differential expression genes analysis in MC38/gp100 cell line with DMSO or type I PRMT inhibitor treatment
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Immunotherapies have produced dramatic responses in reducing tumor growth and prolonging overall survival to unprecedented rates in melanoma, lung cancer, renal cancer and mismatch repair deficient colon cancer patients. Despite approvals for immune checkpoint inhibitors in a wide range of cancers, the majority of patients’ relapse following initial response to immunotherapy or fail to respond altogether. These failures can be attributed to an insufficient immune response against tumors and/or mechanisms co-opted by tumor cells to produce a suppressive tumor microenvironment. Therefore, identification of combination strategies to enhance the response rates of immunotherapies to a broader patient population are the current subject of intensive basic and clinical research. Type I PRMTs have been described as regulators of immune response pathways in several cell types by direct arginine methylation on specific substrates, as well as through indirect mechanisms. Recent work has suggested that arginine methylation may have a role in tumor immunity, yet these roles remain poorly understood. Using the skin cutaneous melanoma (SKCM) TCGA dataset, we show that increased expression of Type I PRMTs is associated with poor clinical response and decreased immune infiltration in melanoma patients. Through a series of preclinical tumor models, we demonstrate that inhibition of Type I PRMTs can increase hallmarks of an inflamed tumor microenvironment and sensitivity to inhibition of the PD-(L)1 signaling axis. Accordingly, Type I PRMT inhibition synergizes with immune checkpoint blockade to induce durable and effective antitumor responses in an array of immunocompetent tumor models. These data provide a rationale to combine Type I PRMT inhibitors with checkpoint blockade to maximize clinical benefit in cancer patients.
 
Overall design mRNA profiles of MC38/gp100 cells treated with DMSO or 1uM GSK3368712 for 5 days
Web link https://pubmed.ncbi.nlm.nih.gov/35181787/
 
Contributor(s) Weiyi P, Leilei S, Yunfei W
Citation(s) 35181787
Submission date Nov 20, 2020
Last update date Jan 31, 2023
Contact name Weiyi Peng
E-mail(s) wpeng2@central.uh.edu
Phone 7137436941
Organization name University of Houston
Street address 3517 Cullen Blvd, Room 3025
City Houston
State/province Texas
ZIP/Postal code 77204
Country USA
 
Platforms (1)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
Samples (4)
GSM4923289 DMSO treatment rep1
GSM4923290 DMSO treatment rep2
GSM4923291 Type I PRMT inhibitor treatment rep1
This SubSeries is part of SuperSeries:
GSE161910 MC38/gp100 cells after type I PRMT inhibitor treatment
Relations
BioProject PRJNA679894
SRA SRP294288

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE161908_RNASeq_DESeq2.xlsx 3.5 Mb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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