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Series GSE161624 Query DataSets for GSE161624
Status Public on May 16, 2022
Title ChIP sequencing of ETV6-NCOA2 H3K27Ac profile in T/M mixed-phenotype acute leukemia
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary H3K27Ac ChIP-sequencing of CD34 positive cord blood cells expressing either ETV6-NCOA2 or empty-vector in-vitro and ETV6-NCOA2 patient derived xenograft.
 
Overall design Expression of ETV6-NCOA2 or empty vector in CD34+ cells in-vitro (for each biological replicate, at least three different cord blood samples were mixed). Sample of ETV6-NCOA2 patient-derived xenograft.
 
Contributor(s) Izraeli S, Fishman H
Citation(s) 34624096
Submission date Nov 17, 2020
Last update date May 17, 2022
Contact name Gilgi Friedlander
Organization name Weizmann Institute of Science
Street address Hertzel st
City Rehovot
ZIP/Postal code 76100
Country Israel
 
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (6)
GSM4911338 ETV6-NCOA2 CD34
GSM4911339 ETV6-NCOA2 CD34_control
GSM4911340 Empty vector CD34
This SubSeries is part of SuperSeries:
GSE162338 ETV6-NCOA2 expression in CD34 positive cord blood cells
Relations
BioProject PRJNA678961
SRA SRP292911

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE161624_RAW.tar 1.7 Mb (http)(custom) TAR (of NARROWPEAK)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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