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Series GSE161252 Query DataSets for GSE161252
Status Public on Jan 04, 2023
Title White matter abnormalities in the Hdc knockout mouse, a model of tic and OCD pathophysiology
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary An inactivating mutation in the histidine decarboxylase gene (Hdc) has been identified as a rare but high-penetrance genetic cause of Tourette syndrome (TS). TS is a neurodevelopmental syndrome characterized by recurrent motor and vocal tics; it is accompanied by structural and functional abnormalities in the cortico-basal ganglia circuitry. Hdc, which is expressed both in the posterior hypothalamus and peripherally, encodes an enzyme required for the biosynthesis of histamine. Hdc knockout mice (Hdc-KO) recapitulate this mutation and exhibit behavioral and neurochemical abnormalities that parallel those seen in patients with TS. Exploratory RNA-Seq analysis revealed, unexpectedly, that genes associated with oligodendrocytes and with myelin production are upregulated in the dorsal striatum of these mice. This was confirmed by qPCR and immunoblotting. These results suggest an abnormality in myelination in the striatum. To test this in an intact brain, we performed whole-brain ex vivo diffusion tensor imaging (DTI), which revealed reduced fractional anisotropy (FA) in the mid-dorsal striatum. While the DTI literature in individuals with TS is sparse, these results are consistent with findings of disrupted descending cortical projections in patients with tics. The Hdc-KO model may represent a powerful system in which to examine the developmental mechanisms underlying this abnormality.
 
Overall design 28 samples in total; 1-3 brain samples from 2-3 month old Hdc knockout, heterozygous, and wild-type mice. Dissected tissues were ventral and dorsal striatum, hypothalamus, and motor cortex.
 
Contributor(s) Jindachomthong K, Hyder F, Yang C, Frick L, Pittenger C, Dougherty J
Citation(s) 36504678
Submission date Nov 11, 2020
Last update date Jan 05, 2023
Contact name Joseph D Dougherty
Organization name Washington University
Department Genetics and Psychiatry
Street address 4566 Scott Ave, box 8232
City St Louis
State/province Missouri
ZIP/Postal code 63110
Country USA
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (28)
GSM4903974 hdc_het_dorsal_striatum_4b_ACCCACT
GSM4903975 hdc_het_dorsal_striatum_5b_AGATACT
GSM4903976 hdc_het_dorsal_striatum_6b_TGTTTGT
Relations
BioProject PRJNA676035
SRA SRP292172

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Supplementary file Size Download File type/resource
GSE161252_RAW.tar 3.0 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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