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Series GSE160219 Query DataSets for GSE160219
Status Public on Mar 11, 2021
Title Immunotherapy against amyloid beta is modulated by meningeal lymphatic function V
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary A growing body of evidence points to passive immunotherapy as a promising therapeutic strategy against AD. Herein, we show that meningeal lymphatic vasculature becomes dysfunctional in AD transgenic mice and that manipulating meningeal lymphatic drainage affects the outcome of anti-Aβ immunotherapy.
 
Overall design Brain cells were isolated from 22-26 months old male APPswe mice, after intracisterna magna injections of 5 uL of AAV1-CMV-eGFP or AAV1-CMV-mVEGF-C (each at 1012 GC/μL) in combination with intraperitoneal injections of mIgG or mAducanumab antibodies (each at 40 mg/kg). Brain cell suspensions were obtained by enzymatic and mechanic digestion of right brain hemisphere tissue, stained for surface markers and enriched for specific populations (microglia/macrophages, blood endothelial cells and mural cells) by FACS sorting. Each individual sample used in this single cell RNA sequencing experiment resulted from brain cells pooled from 3 mice.
 
Contributor(s) Da Mesquita S, Papadopoulos Z, Dykstra T, Wall M, Farias FG, Brase L, Jiang H, Kodira CD, Alves de Lima K, Herz J, Louveau A, Goldman DH, Salvador AF, Onengut-Gumuscu S, Farber E, Dabhi N, Kennedy T, Milam M, Baker W, Smirnov I, Rich SS, Holtzman DM, Cruchaga C, Harari O, Kipnnis J
Citation(s) 33911285, 37085492
Submission date Oct 27, 2020
Last update date May 12, 2023
Contact name Jonathan Kipnis
Organization name Washington University in Saint Louis
Department Pathology and Immunology
Lab Kipnis Lab
Street address 4515 McKinley Ave
City Saint Louis
State/province MO
ZIP/Postal code 63110
Country USA
 
Platforms (1)
GPL16417 Illumina MiSeq (Mus musculus)
Samples (16)
GSM4869242 eGFP+mIgG Sample 1
GSM4869243 eGFP+mIgG Sample 2
GSM4869244 eGFP+mIgG Sample 3
This SubSeries is part of SuperSeries:
GSE141917 Immunotherapy against amyloid beta is modulated by meningeal lymphatic function
Relations
BioProject PRJNA672345
SRA SRP288787

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SOFT formatted family file(s) SOFTHelp
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Supplementary file Size Download File type/resource
GSE160219_gfp_adu.tar.gz 78.1 Mb (ftp)(http) TAR
GSE160219_gfp_igg.tar.gz 39.5 Mb (ftp)(http) TAR
GSE160219_vegfc_adu.tar.gz 37.9 Mb (ftp)(http) TAR
GSE160219_vegfc_igg.tar.gz 46.6 Mb (ftp)(http) TAR
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Raw data are available in SRA
Processed data are available on Series record

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