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Series GSE160067 Query DataSets for GSE160067
Status Public on Feb 13, 2024
Title Epigenetic analyses of hematopoietic stem cells
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary We analyzed genome-wide chromatin accessibility in hematopoietic stem cells (HSCs) using ATAC-seq in mice after sham operation and transverse aortic constriction (TAC).
 
Overall design ATAC-seq of HSCs.
 
Contributor(s) Ichiro M, Yukiteru N, Katsuhito F
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Submission date Oct 25, 2020
Last update date Feb 14, 2024
Contact name Ichiro Manabe
E-mail(s) manabe-tky@umin.ac.jp
Organization name Chiba University
Street address 1-8-1 Inohana, Chuo
City Chiba
ZIP/Postal code 260-8670
Country Japan
 
Platforms (1)
GPL18480 Illumina HiSeq 1500 (Mus musculus)
Samples (6)
GSM4859446 Control HSC rep1 [ATAC-seq]
GSM4859447 Control HSC rep2 [ATAC-seq]
GSM4859448 Control HSC rep3 [ATAC-seq]
This SubSeries is part of SuperSeries:
GSE160068 Transcriptomic and epigenetic analyses of hematopoietic stem cells
Relations
BioProject PRJNA671722
SRA SRP288506

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE160067_RAW.tar 199.9 Mb (http)(custom) TAR (of BEDGRAPH)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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