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Series GSE159723 Query DataSets for GSE159723
Status Public on Sep 14, 2021
Title Transcriptome sequencing of genes related to glucose availability in Schizosaccharomyces pombe by RNA-seq analysis
Organism Schizosaccharomyces pombe
Experiment type Expression profiling by high throughput sequencing
Summary Gene expression profiles in Schizosaccharomyces pombe mid-log-phase cells grown in three different Synthetic Dextrose medium with different glucose content were compared using the RNA sequencing method. Expression patterns of genes that function in carbohydrate metabolism were downregulated as expected, and these genes were downregulated in line with the increase in glucose content. Significant and consistent changes in the expression were observed such as genes that encoding retrotransposable elements, heat shock proteins, glutathione S-transferase, cell agglutination protein, and conserved fungal proteins.
 
Overall design Examination and comparement of transcriptom data from S.pombe wild type cells grown in different Synhetic Medium with different glucose content.
 
Contributor(s) TARHAN C, ÇAKIR Ö
Citation(s) 34460892
Submission date Oct 21, 2020
Last update date Sep 14, 2021
Contact name Ozgur Cakir
E-mail(s) ozgurckr@istanbul.edu.tr
Phone +905555648435
Organization name Istanbul University
Street address Vezneciler
City Istanbul
ZIP/Postal code 34118
Country Turkey
 
Platforms (1)
GPL13988 Illumina HiSeq 2000 (Schizosaccharomyces pombe)
Samples (3)
GSM4838746 T1
GSM4838747 T2
GSM4838748 T3
Relations
BioProject PRJNA670335
SRA SRP287941

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SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE159723_T1_vs.T3.xlsx 71.6 Kb (ftp)(http) XLSX
GSE159723_T1_vs._T2.xlsx 36.7 Kb (ftp)(http) XLSX
GSE159723_T2_vs._T3.xlsx 63.3 Kb (ftp)(http) XLSX
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Raw data are available in SRA
Processed data are available on Series record

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