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Series GSE159668 Query DataSets for GSE159668
Status Public on Sep 01, 2021
Title Whole transcriptome analysis of hypoxic pulmonary hypertension
Organism Rattus norvegicus
Experiment type Expression profiling by high throughput sequencing
Non-coding RNA profiling by high throughput sequencing
Summary Non-coding RNA plays an important regulatory role in the occurrence and development of hypoxic pulmonary hypertension (HPH). Therefore, we use high-throughput RNA sequence and bioinformatics methods to analyze the whole transcriptome HPH rats in lung tissue.
Overall design Two-group experiment (Con = normal atmospheric conditions (control) vs HPH = atmospheric hypoxia). Three biological replicas of each group in rat lung tissue.
Contributor(s) Xing X, Yang J, Xu S, Liu J
Citation(s) 34374413
Submission date Oct 20, 2020
Last update date Sep 01, 2021
Contact name xiqian xing
Phone 087165156650
Organization name The Affiliated Hospital of Yunnan University, The Second People's Hospital of Yunnan Province
Department Department of Respiratory Medicine
Street address No. 176, Qingnian Road
City Kunming
State/province Yunnan
ZIP/Postal code 650021
Country China
Platforms (1)
GPL14844 Illumina HiSeq 2000 (Rattus norvegicus)
Samples (12)
GSM4837369 Con1
GSM4837370 Con2
GSM4837371 Con3
BioProject PRJNA670164
SRA SRP287804

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SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE159668_LncRNA.txt.gz 85.7 Kb (ftp)(http) TXT
GSE159668_circRNA.fasta.fa.gz 4.6 Mb (ftp)(http) FA
GSE159668_circRNA.gtf.gz 380.1 Kb (ftp)(http) GTF 242.2 Kb (ftp)(http) TXT
GSE159668_circRNA.txt.gz 51.9 Kb (ftp)(http) TXT
GSE159668_lncRNA.fasta.gz 2.4 Mb (ftp)(http) FASTA
GSE159668_lncRNA.gtf.gz 414.6 Kb (ftp)(http) GTF
GSE159668_mRNA.txt.gz 773.2 Kb (ftp)(http) TXT
GSE159668_miRNA.txt.gz 17.5 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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