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Series GSE159418 Query DataSets for GSE159418
Status Public on Dec 27, 2020
Title IL-22-dependent dysbiosis and mononuclear phagocyte depletion contribute to steroid-resistant gut graft-versus-host disease in mice II
Organism Mus musculus
Experiment type Other
Summary CD4+ and CD8+ T cells can reciprocally differentiate into Th/Tc1, Th/Tc17 and Th/Tc22. Although alloreactive Th/Tc1 cells play a critical role in initiating pathogenesis of gut acute graft-versus-host disease (Gut-aGVHD), the pathogenic T cells in steroid-resistant Gut-aGVHD (SR-Gut-aGVHD) remains unclear. Here, we show that in murine models of SR-Gut-aGVHD, the pathogenesis is associated with reduction of IFN-g+ Th/Tc1 and IL-17A+IL-22- Th/Tc17 cells but expansion of IL-17-IL-22+ Th/Tc22, particularly Tc22 cells. The IL-22 from Th/Tc22 cells causes dysbiosis.
 
Overall design Examination of gut microbiome difference in the mouse model of acute gut GVHD
 
Contributor(s) Song Q, Zeng D
Citation(s) 33547295
Submission date Oct 12, 2020
Last update date Feb 22, 2021
Contact name Defu Zeng
E-mail(s) dzeng@coh.org
Phone 626-218-3587
Organization name The Beckman Reseach Institute
Department Immunology & Theragnostics
Lab Defu Zeng Lab
Street address 1500 East Duarte Road
City Duarte
State/province California
ZIP/Postal code 91010
Country USA
 
Platforms (1)
GPL16417 Illumina MiSeq (Mus musculus)
Samples (118)
GSM4829414 S45.170228
GSM4829415 S48.170228
GSM4829416 S46.170228
This SubSeries is part of SuperSeries:
GSE159419 IL-22-dependent dysbiosis and mononuclear phagocyte depletion contribute to steroid-resistant gut graft-versus-host disease in mice
Relations
BioProject PRJNA668828
SRA SRP287188

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE159418_GEO_abundance.txt.gz 6.5 Kb (ftp)(http) TXT
GSE159418_GEO_read_counts-per-20k-reads.txt.gz 5.5 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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