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Series GSE158021 Query DataSets for GSE158021
Status Public on Feb 10, 2021
Title Different p53 status controls resistance to 5-fluorouracil via distinct chromatin accessibility dynamics in human colorectal cancer cell line
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 33613715
https://doi.org/10.3892/ol.2021.12487
Submission date Sep 16, 2020
Last update date Apr 07, 2021
Contact name Hyoung-Pyo Kim
E-mail(s) kimhp@yuhs.ac
Organization name Yonsei University College of Medicine
Department Department of Tropical Medicine
Street address Yonsei-ro 50-1
City Seoul
ZIP/Postal code 03722
Country South Korea
 
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (26)
GSM4781634 p53 WT 5-FU non treated rep1 [ATAC-seq]
GSM4781635 p53 WT 5-FU 300um treated 24h rep1 [ATAC-seq]
GSM4781636 p53 KO 5-FU non treated rep1 [ATAC-seq]
This SuperSeries is composed of the following SubSeries:
GSE157949 p53 influences 5-FU-induced chromatin accessibility [ATAC-seq]
GSE157950 p53 influences 5-FU-induced chromatin accessibility [ChIP-seq]
GSE157951 Next Generation Sequencing Facilitates Quantitative Analysis of TP53-WT and TP53-KO HCT116 cells transcriptomes [RNA-seq]
Relations
BioProject PRJNA663773

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE158021_RAW.tar 862.5 Mb (http)(custom) TAR (of BED, BW, NARROWPEAK, TXT)
SRA Run SelectorHelp

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