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Series GSE15696 Query DataSets for GSE15696
Status Public on Apr 01, 2010
Title SNP chip data of EWS
Organism Homo sapiens
Experiment type Genome variation profiling by SNP array
Summary Ewing sarcoma is one of the solid tumor that developed in children. We performed SNP-chip analysis against 27 specimens of Ewing sarcoma using Affymetrix GeneChip and CNAG/AsCNAR software. Our study revealed the detailed profile of copy number alterations in Ewing sarcoma.

Keywords: SNP-chip
Overall design To identify oncogenic lesions in Ewing sarcoma, we performed a genome-wide analysis of Ewing sarcoma samples using high-density SNP arrays (Affymetrix GeneChip).
Contributor(s) Takita J, Chen Y, Kato M, Ohki K, Sanada M, Igarashi T, Hayashi Y, Ogawa S, Nishimura R
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Submission date Apr 16, 2009
Last update date Dec 22, 2017
Contact name Motohiro Kato
Organization name University of Tokyo
Street address 7-3-1, Hongo, Bunkyo-ku
City Tokyo
ZIP/Postal code 113-8655
Country Japan
Platforms (2)
GPL2004 [Mapping50K_Hind240] Affymetrix Human Mapping 50K Hind240 SNP Array
GPL3718 [Mapping250K_Nsp] Affymetrix Mapping 250K Nsp SNP Array
Samples (27)
GSM393017 case 38
GSM393018 case 24
GSM393019 case 25
BioProject PRJNA116647

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE15696_RAW.tar 691.4 Mb (http)(custom) TAR (of CEL, CHP)
Processed data included within Sample table
Processed data provided as supplementary file

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