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Series GSE156652 Query DataSets for GSE156652
Status Public on Aug 22, 2020
Title The Brazilian Initiative on Precision Medicine (BIPMed)
Organism Homo sapiens
Experiment type Genome variation profiling by SNP array
SNP genotyping by SNP array
Summary The development of precision medicine strategies requires prior knowledge of the genetic background of the target population. However, despite the availability of data from admixed Americans within large reference population databases, we cannot use these data as a surrogate for that of the Brazilian population. This lack of transferability is mainly due to differences between ancestry proportions of Brazilian and other admixed American populations. To address the issue, a coalition of research centres created the Brazilian Initiative on Precision Medicine (BIPMed), an initiative of five Research Innovation and Dissemination Centers (RIDCs) supported by FAPESP.
Overall design Affymetrix SNP arrays were performed according to the manufacturer's directions on DNA extracted from peripheral blood samples from 340 reference individual.
The Brazilian Research Institute for Neuroscience and Neurotechnology (BRAINN), Center for Computational Science and Engineering (CCES), Center for Research in Cell Therapy (CTC), Center for Research on Inflammatory Diseases (CRID), Obesity and Comorbidities Research Center (OCRC)
Contributor(s) Rocha CS, Secolin R, Rodrigues MR, Carvalho BS, Lopes-Cendes I
Citation(s) 33083011
Submission date Aug 21, 2020
Last update date Nov 21, 2020
Contact name Cristiane de Souza Rocha
Organization name Unicamp
Department Medical Genetics
Street address Av Tessália Vieira de Camargo, 126 Cidade Universitária "Zeferino Vaz"
City Campinas
State/province São Paulo
ZIP/Postal code 13083-887
Country Brazil
Platforms (1)
GPL6801 [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array
Samples (340)
GSM4735805 BPM_0001
GSM4735806 BPM_0002
GSM4735807 BPM_0003
BioProject PRJNA658602

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE156652_Matrix_BPM_genotype.txt.gz 2.5 Gb (ftp)(http) TXT
GSE156652_RAW.tar 13.3 Gb (http)(custom) TAR (of CEL, CHP)
Processed data are available on Series record
Processed data provided as supplementary file

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