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Series GSE155966 Query DataSets for GSE155966
Status Public on Dec 27, 2020
Title Single cell RNA seq analysis of postnatal mouse utricle
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Undamaged utricular sensory epithelia from P2, P4, and P6 mice were isolated using FACS and underwent Smartseq-2 protocol for single cell RNA seq. Data was generated using Illumina NextSeq 500, paired end, 75-150bp reads with median depth of ~0.5 million reads per cell.
 
Overall design FACS sorted mouse utricle cells, Smart-seq2 protocol
 
Contributor(s) Cheng AG, Heller S
Citation(s) 34260939
NIH grant(s)
Grant ID Grant title Affiliation Name
K08 DC019683 Single cell analysis of mitotic regeneration in the mouse vestibular system University of California San Francisco Taha A Jan
R01 DC013910 Pathways towards regenerating the mammalian cochlea STANFORD UNIVERSITY Alan Gi-Lun Cheng
R01 DC016919 Mouse vestibular regeneration and function STANFORD UNIVERSITY Alan Gi-Lun Cheng
T32 DC015209 Clinician-scientist training program in otolaryngology STANFORD UNIVERSITY Alan Gi-Lun Cheng
R01 DC015201 Response of cochlear hair cells to pathological changes in the auditory system STANFORD UNIVERSITY Stefan Heller
Submission date Aug 10, 2020
Last update date Jul 30, 2021
Contact name Taha Jan
Organization name VUMC
Department Otolaryngology
Lab Taha Jan Lab
Street address 1215 21st Ave S, Suite 7209
City Nashville
State/province TN
ZIP/Postal code 37232
Country USA
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (1002)
GSM4717251 Murine utricle cells [Cell_1]
GSM4717252 Murine utricle cells [Cell_2]
GSM4717253 Murine utricle cells [Cell_3]
Relations
BioProject PRJNA656242
SRA SRP276884

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Supplementary file Size Download File type/resource
GSE155966_processed.data.csv.gz 8.1 Mb (ftp)(http) CSV
SRA Run SelectorHelp
Processed data are available on Series record
Raw data are available in SRA
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