GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
Series GSE154591 Query DataSets for GSE154591
Status Public on Jul 17, 2020
Title Genomic comparison of post-radiation versus sporadic sarcomas
Organism Homo sapiens
Experiment type Genome variation profiling by genome tiling array
Genome variation profiling by SNP array
Summary Post-radiation sarcomas are rare secondary cancers arising from radiation therapies. To date, few genetic specificities have been described for such malignancies and the oncogenesis of sarcomas with complex genetics (both sporadic and post-radiation) remains largely misunderstood. We performed genomic analyses on both sporadic and post-radiation sarcomas to study their copy-number alterations. This analysis is described in Lesluyes et al. 2019 (PMID: 31243333).
Overall design We used DNA-arrays on 56 sporadic (Affymetrix SNP6 arrays) and 77 post-radiation (Affymetrix CytoScanHD) sarcomas.
Contributor(s) Lesluyes T, Baud J, Chibon F
Citation(s) 31243333
Submission date Jul 16, 2020
Last update date Jul 19, 2020
Contact name Frédéric Chibon
Organization name Cancer Research Center of Toulouse
Department Team 19 - INSERM UMR1037
Lab Sarcoma Oncogenesis
Street address 2 avenue Hubert Curien
City Toulouse
ZIP/Postal code 31000
Country France
Platforms (2)
GPL6801 [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array
GPL16131 [CytoScanHD_Array] Affymetrix CytoScan HD Array
Samples (133)
GSM4675038 ADN0004
GSM4675039 ADN0006
GSM4675040 ADN0016
BioProject PRJNA646742

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE154591_GPL16131.tsv.gz 1.8 Gb (ftp)(http) TSV
GSE154591_GPL6801.tsv.gz 965.6 Mb (ftp)(http) TSV
GSE154591_RAW.tar 3.7 Gb (http)(custom) TAR (of CEL)
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap